Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0350 ATGGAACGGCTCCCGCCGATGGATCTGATGCGCTCCGAGAAGATGACGCTCGTCCAACTCATCATTCCGGCCGAGTCCGCTCACCGAGCCGTCTCCTATCTCGGCGAACTCGGCCTCCTCCAATTCCGAGACGAACGGTTGAAGATTGCTATGTTGTTGAATTTCACTGTTGAAATGAATCTGTTAAATTCTGAGAAAAGTCCCTTTCAGAGAACGTTTGTTAACCAGGTGAAGCGATGTGCAGAAATTTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGTGTAGTATCTTCTGATCCAGTAATGCAGCCAGATATTCACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGTGCTAACTGAAATGAATTCTAACAGTGAGAAACTTCAGCAATCATATATGGAACTCTTGGAGTTCAAAGTTGTATTGCAAAAGGCATCTGCTGTTCTATTTTCAAATCATGGCCATGCTGTTCCAGAAGAGAGAGAACTAGAGGAGAATATTAACTCAAAAGGAGATTATGTTGAGACACCATTTTTGTTTGAACAGGAAACGAGTATGGAGCCAACAAATCAATCTGGTTTAAGATTTATCAGCGGCACAATTTGTAAATCCAAAGTTCTTAACTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAACATGCTGTTCAATCAGGAACCAGCTGATGACCAACTCATGGATCCTATTTCAAATGAGATGATAGAGAAAGCAGTATTTGTGGTGCTTTTCTCTGGGGAGCGAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCGTTTGGGGCACATAGTTACCCTGTCCCTGAAGATATAAGTAAACAAAGGCAGATAATTAACGAGGTTTCATCACGTCTTGCTGACATAGAAGCTACTTTGGATGCTGGGACTAGGCACCGGAATAAGGCTCTAGCTTCTGTAGGAGATAATGTTGAAAAATGGATGGACATGGTAAGAAGAGAGAAAGCTGTCTATGATACATTGAACATGCTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGGGAAGGATGGTGCCCTATATCTGCAACAGCACAGATTCAGGAGGCATTGCAACGTGCAACTTTTGATAGCAATTCACTAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCTCCGCCTACATATTTTAGGACCAACAATTTCACAAGCCCATATCAGGAAATCGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCGAATCCTGCAGTTTACACAGTTATTACATTTCCATTTCTTTTCGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTTGGAGCATTAGTCCTTATAGCATGTGAAAAAAAGCTCAGCGCTCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTAATGTCATTATTTTCAATCTACTGTGGGTTAATCTACAATGAATTTTTCTGTGTTCCTTTTCACATATTTGGAGTGTCGGCTTACAAATGCCGAGATAATTCATGCAGGGATGCGCATACCATTGGTTTAGTCAAATATCGAGAAACATACCCATTTGGTGTGGATCCCAGATGGCGTGGAAGTCGTTCAGAATTGGCTTTCCTTAACTCCCTCAAGATGAAGATGTCCATTCTACTTGGTGTGGTGCATATGAACTTAGGAATTATGTTGAGTTATTTCAACGCTTGTTTTTTTGTTAACTCAATAGATATAAGGTACCAGTTTGTGCCACAAATGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCACAAGCGGACCTCTATCATGTAATGATTTACATGTTTTTAAGCCCTTTTGAGAAACTCGGTGAGAATCAGTTATTCTGGGGCCAAGGGGTACTTCAAGTAGTTTTGTTACTTTCTGCTCTAATTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTTATGATGAGAGATTTTTTCAAGGGCAAACTTATGGTAAGCTTAATACAACTGAGATGGAGACTGAGGTGGAACCGGGTTCAGCAGGGCAACATCAGGAGGAATTCAATTTCAGTGAGGTCTTTGTCCACCAAATGATTCACGCCATTGAGTTTGTTCTAGGCTCAGTTTCAAATACAGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGAAAATATCATCATTCGGATAATAGGGCTAGTTGTTTTTGCCTTTGCAACTGCCTTTATACTACTCATGATGGAGAGTCTGAGTGCGTTTCTTCATGCCCTGCGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACTATGGCGATGGCTACAAGTTCAAACCTTTTTCCTTTGCCTCCTTAATAGATGATGAAAATTGA 2499 0.4074 MERLPPMDLMRSEKMTLVQLIIPAESAHRAVSYLGELGLLQFRDERLKIAMLLNFTVEMNLLNSEKSPFQRTFVNQVKRCAEISRKLRFFKDQISKAGVVSSDPVMQPDIHLEDLEIQLAEHEHVLTEMNSNSEKLQQSYMELLEFKVVLQKASAVLFSNHGHAVPEERELEENINSKGDYVETPFLFEQETSMEPTNQSGLRFISGTICKSKVLNFERMLFRATRGNMLFNQEPADDQLMDPISNEMIEKAVFVVLFSGERARTKILKICEAFGAHSYPVPEDISKQRQIINEVSSRLADIEATLDAGTRHRNKALASVGDNVEKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPISATAQIQEALQRATFDSNSLVGIIFHSMDALESPPTYFRTNNFTSPYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIACEKKLSAQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFCVPFHIFGVSAYKCRDNSCRDAHTIGLVKYRETYPFGVDPRWRGSRSELAFLNSLKMKMSILLGVVHMNLGIMLSYFNACFFVNSIDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFEKLGENQLFWGQGVLQVVLLLSALIAVPWMLFPKPFILKKLYDERFFQGQTYGKLNTTEMETEVEPGSAGQHQEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYENIIIRIIGLVVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYYGDGYKFKPFSFASLIDDEN* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0350 832 PANTHER VACUOLAR PROTON ATPASE A1 3 831 - -
Amo13g0350 832 Pfam V-type ATPase 116kDa subunit family 57 824 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo13g0350 832 PIRSF ATP6V0A1 5 832 IPR026028 GO:0000220|GO:0046961
Amo13g0350 832 Coils Coil 112 139 - -
Amo13g0350 832 PANTHER VACUOLAR PROTON ATPASES 3 831 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0350 Amo-Chr13 4729818 4737531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0350 1 825 Primary Pumps ATPases(2) AT2G28520 74.065 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0350 K02154 - gmx:100800799 1364.75