Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0323 ATGCTAAGTAAGACTCTTTCTTTTGCCACTGCAATGGGCTGCTGTAATTGCTTCGGCTTCATAAGGAGTCAAAGCCGACAGAGAGCTAAGCCCCGCCATGTTAACCGTAATCCCTCCCAGGAGCGGTTGTTGGATGATGACATGGATGACATGGATGACGATGATGAGCTGATGTATGGTGACAATGTTGCTAACTCCAGTAGTGGAGATGATAGTGATGGGCAAATTCGCCCCAAGCGATCCGAGGATATTTTGAACTTCAGAGCAGAGAATGACTTGGTTTGTAGGAAGTTTCCTGTTAAGGAGACTCACAAAGTTATTCGATCAGAGGATGACAATGGGACCAAGATGATTAATCAGTATGTTCGTGAATATAAGATCGGTTCTGGTAGCTATGGGAAAGTGGCGCTTTATCGAAACTCCATTGATGGAAAGCATTATGCAATTAAGTCCTTTCACAAGTCTCATCTACTGAAGCTTCGAGTTGCACCCTCTGAGACAGCCATGTCTGATGTTCTACGTGAGGTACAAATTATGAAAATGCTAGGGCATCCTAATATAGTCAATCTTATTGAGGTGATTGATGATCCTGAGTCAGATCACTTCTACATGGTACTTGAATATGTGGAAGGCAAGTGGGTTTGTGAGGGTACAGGCCGTGCTTGTGCCTTAGGTGATGAGACTGCTAGGAGATACTTGCGAGATATAGTTTCTGGATTGTCATATCTCCATGCTCATAACATAGTACACGGGGATATTAAACCTGATAATCTGCTGATTACACGGCATGGAACAGTAAAAATAGGGGATTTCAGTGTCAGCCAGGCTGTTGAGGATGATAATGATGAGCTTCGCCGTTCACCTGGCACTCCCGTTTTTACAGCACCAGAATGTATTCTAGGTCTTACCTATCATGGCAAAGCAGCTGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCCTTCCTTGGGGACACACTTCAAGATACATATGACAGAATAGTCAATAATCCAATAATACTCCCAAATGATCTGAACCCACATGTAAAGAACCTAATACAAGGACTACTTTTGAAAGACCCGAAACTTAGGATGACTCTGAGTGATGTTGCGGCACATAGCTGGGTCGTTGGAGATGATGGGCCAATTCCTGAGTACCTATGTTGGTGCAGAAGGAAGCGCTTTGGTCAAGAAAGCAACGAAAACAATACTACTGACTAA 1239 0.435 MLSKTLSFATAMGCCNCFGFIRSQSRQRAKPRHVNRNPSQERLLDDDMDDMDDDDELMYGDNVANSSSGDDSDGQIRPKRSEDILNFRAENDLVCRKFPVKETHKVIRSEDDNGTKMINQYVREYKIGSGSYGKVALYRNSIDGKHYAIKSFHKSHLLKLRVAPSETAMSDVLREVQIMKMLGHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGRACALGDETARRYLRDIVSGLSYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAVEDDNDELRRSPGTPVFTAPECILGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIILPNDLNPHVKNLIQGLLLKDPKLRMTLSDVAAHSWVVGDDGPIPEYLCWCRRKRFGQESNENNTTD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0323 412 MobiDBLite consensus disorder prediction 45 59 - -
Amo13g0323 412 ProSiteProfiles Protein kinase domain profile. 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0323 412 Pfam Protein kinase domain 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0323 412 MobiDBLite consensus disorder prediction 27 78 - -
Amo13g0323 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Amo13g0323 412 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 412 - -
Amo13g0323 412 SMART serkin_6 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0323 412 SUPERFAMILY Protein kinase-like (PK-like) 117 394 IPR011009 -
Amo13g0323 412 Gene3D Transferase(Phosphotransferase) domain 1 220 388 - -
Amo13g0323 412 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Amo13g0323 412 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 412 - -
Amo13g0323 412 CDD STKc_LKB1_CaMKK 127 382 - -
Amo13g0323 412 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0323 Amo-Chr13 4373889 4379009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0323 116 389 CBL-interacting serine-threonine protein kinases AT5G35410 32.847 7.31e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Amo13g0323 Pkinase 3.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0323 K00908 - gmx:100789178 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0323 13 4373889 4379009 Amo13g0323 13 4373889 4379009 ECH