Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0286 ATGAAAACCGTTCCGACAACTCCAATCGCCAGGAACCGGAGGTCCGAGCGTCTCGAGAAGAAGACGCCGCCGCCGTCTTCAGCTGCTCCGGCGCCAGCGAGAGGGAGTTCCGATCTGAAGAAGGTCGAGAAGTCTGCCTCGCTAGTGCCGACTCCTTTGAGGAGATCTGGGAGGCTTTCCTCTTCTGGTTCTCCTTCCAAAGGCTCCAATTCGAAGAGCTTTGGGTCTTGTTCTACAGAGGAGAAACGGAAGTGTGTGAAGCGGTTGAGAGCTCAAGAAGAAGAAGAAGAAGAGATGGAGGAAGGTAGTGAGAAAGAGGAACGTGCAGGAAGCGATTCTAAGGTTAACAAGAAGAGATTGCATGCGCGTGTATATCGGGCTTCGTTAAAATCTAAAGGAGATTTTTGTGGGGAATCAAATAAGATGGATAAGTCAACTCAGGAAGGTGATAAGGATAGTGGTAACAAGATGGAAAATGATAGTGTAGTGCCATCTGGAGATGACAAAGCAAAAGAGATGATAGCCGAGTCTAGGTTTAGTGATCCTGTGGAAGACTTATTATTGGAAAATAATGTGGCTCCATCTGGTGCTACAACTGATGAGGCTAGGTTGGCATCTGAATCGAATCAGTCTGATTGCCGTGGAGAGGAGACACCAGAGACAGCAGTGTCAAGGAATACGAAGAGATCCCAGTCTAGGTTGAGTGGGCCTCCAGAAGGACTATCAGAAAAAAATGCATCTAGTGCAGCGCCTCAAAGTGCGCCTCAAAGTGATCACTCTGATTGCAATGGGAACGAGACATCACCGATAAGGAATTCTGTTTTCAATGAAAGTTTGATTCAGAAACGTGTTAGCCATGATAGGGGTGAAAATTTGATACCCTCAAAGAGAAAGGGGACCATGGTGGACATGCATTCAGATGTTTCTGCTACATCGGTTGATGATGAAAACTGCAACTTGGCTGTGGATGCTGACCCTTCAAAGCTGTGTGGTAGTACTGGAGGGACCAATGGACCATGCTCTAAAAGGATAAGGCGGATCTCTTTATCAGATGTGCAAAGCGATCAAAGGAAATTGATCAGTAACGTTGACCAGCTTTCTCCAGGAGTTGATGGTGTAAAGCTATCTTCTCGAGACAAGGAAGGCAAATCTCAAGGTAATGATGCTGAATATATAAGGAAACAACAGAGGTGCTTAATACTTCTACTGAAGCCGGAGATAGCAAAGCTTTGTGAACTTCTTCTTTTACCAGACGATGTCAAGAAAATGGCTGATTCTTGTCTTCAATATGTTCTGAACAATCGTCAAATCTGTACAAAACCAGTCTCAATATTGCAGGCCTTTCAATTATCTTTGTGTTGGACTGCTGCTTCTTTGCTAAAGCATAAACTTGATTTTGAAGCTTCCATCAAGCTTGCAAAGCAGCATTTGAATTTCACCTGTAAGAAAGAAATGGTGGATGAAATTTATTCAATGCTGTTGGGACTGAGAGAAGAGATTTTATCCCACATTTGTGGCATCATTGATTCTTCAAAAGCTCCTGAATCATCAAACCGGGTTTATTCCTATAGTGAAGTGGCACCGGTAGTTGATTCAGCCAACAAAGATACTCCGGAAAGTACTAAAGAAATTCCAGAGTGTGAAAACCAGGAGGGGAACATACATCTGATGCTACAGGAAGAAAAACAAAAGCTTAAAGCAGCTATGGAGAAAGAGAAGACTGAATTTGAGAGAAGGGTTAAACTCCAGTGGGCAGCTATTCGATGTTGTTCTCCTAATGATGTGACGAGGAGCGAAAAACTCAAGCTTTTCACTAGTGAGTATGAAAAAAGAGTACGAGAACTAAACCGGCAGCATGAAATTCGTCTCAAGGATCTTGAGGCCAAACAATTAAAATCATTGCAGAAACCCAATATAGTTGAAGCCATATCAAGGCCAGGATCCGAGGTTGGATTATCTAAGTCTCCTGACAATTCTGTTGCATTCCCAGCAGATACTCTCTCTAAGCCTTGGAATTCTAGAGAACAATGTTCTGGTGGAGCCACAAGCGCAGAAGATGAAGCACAAGGGAGTGAAAAAGTTAGTTGTGAATCTCGTAATGGAGAGATATGTGATCAGGAAACATCAGATGTTCCCAATGGAGAGGCAGCTCTTTCTATGTGTAAATTCAACAATCTGAATGATGATCAAGATGAAGTTCCTCCTTCCTTGAATTCACAATCATCTTCAGAGCATGTCCCATGTTTACCTACCACTAGTATGGTAAATTGTAAGGAAGCTACAGTAGCTGATGAGAGCAATGTTTCAATAAATGTGGAGACTCCAAATTTGCCTTCATCTGATGAAGGAATTGCTTCTTTGAATTTAAGATCACCTCAAAACCATGCCTATAGTCTAAATGAATTGTGTTTGCAAAGTTCTGAGAAATCTGCACAAACTTGCAAGGCTGTTGAAGGCAATGGTTCAAACAATGCTGTGTCTCAGAATTCACGTTTAACTGACGAGAGAATTGCTGCTGGCACCACAGTAGGTGTCCCAGATAGAGAAGCACATGTGGACATGCTCGGGACTGTCAGTGACAGTCATTGTCCAGAAAATATTACTGCTGTGAATCCCTCTTCATCCATGCAGCAAATACCCGATGGTGTTGTCAATGTCTTGGATTTAGAAGAGTTGTATAGACCATGTGTAACTGATGGTAATGCTATTACTATCTTAAATCAACCTTCGTCAGAGAAACAAAATCATGATGGACTCTCATCATCAACTATACCTGCTGGAGAAATTACAATTGAAGTACCCGAAACTGCTTTAGAGGCCTCAATAGTTGTATCAGATAGGGAATTGTCTGTGGAAATTCTTTCGTCACCCCTGAATCAAACATCTGTTGGAGCTTTCGGTCAAAGCAATACAACTCCCCTTCCAACCACACCCTCTTTACCACAACAAATTCCTGATGCAATATTGCCCTGCATGCCTGATGGACAAATTTCAGCAGAATTGTCGGAAACTAACCATGAGGTGGCTGAATGTCAGTTGACAGAAACAGTCAATACAAGTACCACATCAGACCAGCAGGAAGGAGTGGTAACCATGACAGAGAACACTTCGGTCCAGGAGACTGCAATATCTAGACCTGTTGATATCACGGAGCCTCTGGAACAATCGCAGCCAACATCATCTGTACAGTCCCTACCAGACACTGATAGAGCGAGAGAAGTGCAGAACTCTTTGGTGTCTGGTCCAGTTGATATTGTACTAGATAATCAATCCGATAATTCTTCACAGGTTCTTGAGCCTCAAGAGCAGGTGCAGCAGTTACCTGCTCTTGAGCTACTTCCTTCCAACCAGGATCTGTCTCACTTGCCTTTGGCAGCGGGAGTCGAACATCAGCAAACTAATGGAGATACTGTCCACAGCCATCATCTTGAGTCATCAAGTGAAGTTTCAAATGAAGCTGTAGGGCAGCAATCCTCTACTTCGGAACTTGTTTCACACTCACATCACGATGTGCAAACAGCCTCGAATCTGGGCCTTGTTTCATCTATACCTGGTGGAGTGAGAGCACAATCTTCAGACTCAAGAAACTTATCCACATCCTCAGGGGTCAATACTCTTCACATTCAAACTGCGGGCACATCAGCTTCTGGGATTGTTCCACCTATAAGCCGTGATCCACTTAAAAATGAATTGGACAGAATACGTAGACTTGGAGAGAAAAATATGAAGAATCATGAAGATGCGAAATTGCAGTTGAATTCTGATTATGAGAAGGAATTAGCAGAACTTCGCAGGAAGTATGAAGTTAAATTTCGTGACGCCGAGGTTGTGTTTCAGCAACAAAAGATGGAGCTGGATACATACTATAAAACAGTTCTTCTAAATCAAGCCTTGGCTGAGGCTTTTAGGATTAAAAATCATAGCGCATCTGGTAAATCAGGAATGCAGAAAGATGCAAGTTTTACGCAGCAGTTACTTCAGTTTATAACACAGCGATGTGCTTCTCGGCCCCCTCAGGTTGGTTCGCCTTCCCGTGGTCCTATCGGCAGATCTCACCCTGTGGCCCCCCCACCTCTGCGGCTCGCATACAATACAACTGGAGTTTTCTCCAGCGTTCCTGCAAGATCACCTCATCCCCATCCCATGCCTTCATCCTCAGTAAATTTTGAAGCTAGTGGAGAAATCCGTGCTCCCGCACCACATCTGCAGCCTTATCGACCTTCAACACCTGTGCCTGCTTCTGGTACTGGTACAGGTACAGTTCCACCTGGGATGCCAACTCACCCTGCATTGGGTAACATTTCTTTAAATCCTGTGTCACTTCCTTCCCAGCCACCATTGCAGTTGCCGAGGCACCATCAGCCTGATCCTCATAGGGGTCTTTCGCCTGTGACTTCAGGTGGGTTACCCCCTCCTAACTTATCTGCTAACAATCAATCTGATAAGAATGCGCCGAATATTTTGCCTCGTCTGTCACAATTGGCTTCGCTGGACCTAATGACGAGGTTAGGCAGCGGCAGTAACAGACGACCACCCAATGCATCCGTTCAAGCTACATCTGATGATGTAGTGTGTCTATCGGATGATGATGAATGA 4596 0.4415 MKTVPTTPIARNRRSERLEKKTPPPSSAAPAPARGSSDLKKVEKSASLVPTPLRRSGRLSSSGSPSKGSNSKSFGSCSTEEKRKCVKRLRAQEEEEEEMEEGSEKEERAGSDSKVNKKRLHARVYRASLKSKGDFCGESNKMDKSTQEGDKDSGNKMENDSVVPSGDDKAKEMIAESRFSDPVEDLLLENNVAPSGATTDEARLASESNQSDCRGEETPETAVSRNTKRSQSRLSGPPEGLSEKNASSAAPQSAPQSDHSDCNGNETSPIRNSVFNESLIQKRVSHDRGENLIPSKRKGTMVDMHSDVSATSVDDENCNLAVDADPSKLCGSTGGTNGPCSKRIRRISLSDVQSDQRKLISNVDQLSPGVDGVKLSSRDKEGKSQGNDAEYIRKQQRCLILLLKPEIAKLCELLLLPDDVKKMADSCLQYVLNNRQICTKPVSILQAFQLSLCWTAASLLKHKLDFEASIKLAKQHLNFTCKKEMVDEIYSMLLGLREEILSHICGIIDSSKAPESSNRVYSYSEVAPVVDSANKDTPESTKEIPECENQEGNIHLMLQEEKQKLKAAMEKEKTEFERRVKLQWAAIRCCSPNDVTRSEKLKLFTSEYEKRVRELNRQHEIRLKDLEAKQLKSLQKPNIVEAISRPGSEVGLSKSPDNSVAFPADTLSKPWNSREQCSGGATSAEDEAQGSEKVSCESRNGEICDQETSDVPNGEAALSMCKFNNLNDDQDEVPPSLNSQSSSEHVPCLPTTSMVNCKEATVADESNVSINVETPNLPSSDEGIASLNLRSPQNHAYSLNELCLQSSEKSAQTCKAVEGNGSNNAVSQNSRLTDERIAAGTTVGVPDREAHVDMLGTVSDSHCPENITAVNPSSSMQQIPDGVVNVLDLEELYRPCVTDGNAITILNQPSSEKQNHDGLSSSTIPAGEITIEVPETALEASIVVSDRELSVEILSSPLNQTSVGAFGQSNTTPLPTTPSLPQQIPDAILPCMPDGQISAELSETNHEVAECQLTETVNTSTTSDQQEGVVTMTENTSVQETAISRPVDITEPLEQSQPTSSVQSLPDTDRAREVQNSLVSGPVDIVLDNQSDNSSQVLEPQEQVQQLPALELLPSNQDLSHLPLAAGVEHQQTNGDTVHSHHLESSSEVSNEAVGQQSSTSELVSHSHHDVQTASNLGLVSSIPGGVRAQSSDSRNLSTSSGVNTLHIQTAGTSASGIVPPISRDPLKNELDRIRRLGEKNMKNHEDAKLQLNSDYEKELAELRRKYEVKFRDAEVVFQQQKMELDTYYKTVLLNQALAEAFRIKNHSASGKSGMQKDASFTQQLLQFITQRCASRPPQVGSPSRGPIGRSHPVAPPPLRLAYNTTGVFSSVPARSPHPHPMPSSSVNFEASGEIRAPAPHLQPYRPSTPVPASGTGTGTVPPGMPTHPALGNISLNPVSLPSQPPLQLPRHHQPDPHRGLSPVTSGGLPPPNLSANNQSDKNAPNILPRLSQLASLDLMTRLGSGSNRRPPNASVQATSDDVVCLSDDDE* 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0286 1531 Coils Coil 86 109 - -
Amo13g0286 1531 PANTHER HELICASE PROTEIN MOM1 243 636 IPR039322 GO:0031507
Amo13g0286 1531 PANTHER HELICASE PROTEIN MOM1 898 1070 IPR039322 GO:0031507
Amo13g0286 1531 Coils Coil 1242 1273 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1017 1070 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1 298 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 54 76 - -
Amo13g0286 1531 Coils Coil 609 629 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 104 118 - -
Amo13g0286 1531 PANTHER - 898 1070 - -
Amo13g0286 1531 Gene3D - 1224 1305 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 136 183 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1134 1179 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 651 689 - -
Amo13g0286 1531 PANTHER - 243 636 - -
Amo13g0286 1531 PANTHER - 1074 1530 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 192 217 - -
Amo13g0286 1531 Coils Coil 555 579 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1147 1179 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 77 94 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1502 1522 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1399 1490 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 224 280 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 690 704 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1468 1490 - -
Amo13g0286 1531 MobiDBLite consensus disorder prediction 647 711 - -
Amo13g0286 1531 PANTHER HELICASE PROTEIN MOM1 1074 1530 IPR039322 GO:0031507
Amo13g0286 1531 MobiDBLite consensus disorder prediction 1502 1531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0286 Amo-Chr13 3972506 3981752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0286 - - aip:107629238 2800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0286 13 3972506 3981752 Amo13g0286 13 3972506 3981752 ECH
Amo18g0507 18 6617594 6630609 Amo13g0286 13 3972506 3981752 PCT
Amo13g0286 13 3972506 3981752 Amo18g0507 18 6617594 6630609 PCT