Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0284 GAAACTCAGCCAAACCACCGCCGCAAGGAGTGGCATACTGCCGCCGTCGGTCGCACTCAAAGTTCGCCGTCCGTCCGTCTATCTAGCTTCCCTCGTGCTCCAAGTCTTCAACCCCTGTTCGCTGTCACCGATCGCAGCTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGCCGCCGTTTGTTTGCCGTTCACGTTCGCGTCTTCGTTCAGCCGTCATCTTCGTTCGCGTTCTTCGCCGTTCACGTTCTCTCGGCGTTCACCGTTCGCGATCGCTCGCAGTTCACCGTTCGAGTTCGCATTCGCGTTCGTCTGGAAGCCACGTTGCTCTGCTTCAAACTCTGCGACCAACCCGCGCGCTCCACCTAGCCGTCGAACTGCTCTCTTTTGTAGCCGTCGTGATGATTTCTATGCAGCTAATGGCTTGAAAGATTGGGCAACCATTTTCCCCAAAACATCTGTTTTGATTCCAATAAAGGACGTTCCAATCAAAATCTTTGATGTTCAAGATTCACCTTCTCCACCTCCTGGTTTTCTTCCAACAACACCAGTGGTGGAGGCAGGAGAAACCACACAAGGTTCAGATTTATATATTGCAGGGCCTCTTATAGGATTTGGTTTGCTCATAGCATTACTTGCAAGTGGATTATATGTTAAGAGCTTGAAGAAATGGAAAAATGATGCTGTTGTCCCTTCCAGTGATTCAAACTCCACCAACCTGATATGCTCAACAACTGGAAGCTCTCCTATGTATATGGAAACCAGCAGAAGATGCTCCACGGCTTCATGGCTGACGCCGGATCTTCTTGCAGAAATTAAGTACTGCTTGGTTAACTACACCATAGAGGAGATTGAGAAGGCCACCAAGAATTTCAGTGAAGAAAACAAGATTGGTGATTTGGCCTATAAGGGATTACTCAATAATCTTGAGGAGGTGATGGTAAAGAGGATGAGGTTTGAAGACACAGGACAGGTAATTGATTTGCATTCTAAGATCAACCACTTTAACATTGTGGAATTGCTTGGTGTTTGTTATGGTAGTGAGAGCAAAGTTTCATCATCACCATCATGGTCTTATCTGATTTTTGAATTGCCTAAAAATGGTTGCTTAAGGGAGTGTTTATCTGATCCATGCAATAATCTAAATTGGTACAAAAGGATACAAATTGCTTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTGCTTTCCCTTCATATGCTCACATGAATGTCAATAGTAGAAACATATTCATAACTTCAAAATGGAGGGGGAAACTAGCAGATGTTGGTAGAGCATTGGCTATAAAATCCACACCCAAAAAGAGAAATAATGATAGTATAGAACTTGTTAAAGGATGGGTGGCACCAGAATACCTCTTGAATAGGACAGTTTCTGAGAAAGTTGACATTTTTGCATTTGGGGTTGTGTTGCTTGAGTTGATCTCAGGAAGGGACAATTTTGATGAGAAAACAGCGAAAGATTCACTTGGATTTTTGTTGGGGGAAGCAAGTGAAGGTGGGTGTTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATCTGAAGGATTATGATCTTCCAGAAGCTTTGTGTTTGTCTTTCTTGGCAAAGGATTGTGTTGCAGATGATCCAATGTATAGACCAACCATGGATGATATCATGAAAGTCCTTTCAAAAATGGTTTAA 1707 0.4405 ETQPNHRRKEWHTAAVGRTQSSPSVRLSSFPRAPSLQPLFAVTDRSCFLELGVRRLCLLSRASAAVCLPFTFASSFSRHLRSRSSPFTFSRRSPFAIARSSPFEFAFAFVWKPRCSASNSATNPRAPPSRRTALFCSRRDDFYAANGLKDWATIFPKTSVLIPIKDVPIKIFDVQDSPSPPPGFLPTTPVVEAGETTQGSDLYIAGPLIGFGLLIALLASGLYVKSLKKWKNDAVVPSSDSNSTNLICSTTGSSPMYMETSRRCSTASWLTPDLLAEIKYCLVNYTIEEIEKATKNFSEENKIGDLAYKGLLNNLEEVMVKRMRFEDTGQVIDLHSKINHFNIVELLGVCYGSESKVSSSPSWSYLIFELPKNGCLRECLSDPCNNLNWYKRIQIAFDIATCLYYLHCCAFPSYAHMNVNSRNIFITSKWRGKLADVGRALAIKSTPKKRNNDSIELVKGWVAPEYLLNRTVSEKVDIFAFGVVLLELISGRDNFDEKTAKDSLGFLLGEASEGGCFEGLRSFMDPNLKDYDLPEALCLSFLAKDCVADDPMYRPTMDDIMKVLSKMV* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0284 568 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 139 567 - -
Amo13g0284 568 MobiDBLite consensus disorder prediction 1 20 - -
Amo13g0284 568 Gene3D Transferase(Phosphotransferase) domain 1 372 568 - -
Amo13g0284 568 SUPERFAMILY Protein kinase-like (PK-like) 277 564 IPR011009 -
Amo13g0284 568 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 139 567 - -
Amo13g0284 568 ProSiteProfiles Protein kinase domain profile. 212 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0284 568 Pfam Protein tyrosine and serine/threonine kinase 330 505 IPR001245 GO:0004672|GO:0006468
Amo13g0284 568 Gene3D Phosphorylase Kinase; domain 1 262 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0284 Amo-Chr13 3964221 3968852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0284 282 568 Receptor kinase-like Gene Family AT2G33580 34.343 4.63e-42 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo13g0284 PK_Tyr_Ser-Thr 5.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0284 - - gmx:100818937 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0284 13 3964221 3968852 Amo13g0284 13 3964221 3968852 ECH