Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0275 ATGCCTGAAATTGAAGGATCTCCGGGAAGCTCCATGCATGGAGTCACCGGAAGAGAACAAACCTTCATATCCTCCGTCTCATCCCCAATGGTTCCCACCGACACCACGGCCAACTTCGCCTTGCCCGTGGATTCAGAGCACAAGGCCAAAGTCTTCAAGATCTTCTCCTTAGCCAATCCTCACATGAGAACCTTCCACTTGTCATGGATATCATTCTTTACTTGCTTCGTCTCTACCTTCGCCGCCGCCCCTCTCATCCCCATAATCCGGGACAACCTAAACCTAACCAAGGTAGACATTGGCAACGCCGGTGTTGCCTCCGTCTCCGGAAGCATATTCTCCAGGCTCACAATGGGTGCAGTTTGCGACCTCTTAGGGCCGCGATACGGCTGCGCATTCCTTATCATGTTAACCGCGCCGACTGTATTCTGCATGTCGTTTGTTAACGACGCTGCAGGATACATAGCGGTGCGGTTCATGATAGGGTTTTCGCTTGCAACATTCGTGTCGTGCCAGTATTGGATGAGTACAATGTTTAATAGTAAGATCATAGGGTTTGTGAATGGAACTGCGGCGGGGTGGGGGAACATGGGTGGCGGAGCCACCCAGTTGATAATGCCGTTGGTTTATGAGGTGATTAGGAAAGCTGGGTCAACTCCATTCACTGCATGGAGGATTGCTTTCTTTGTACCCGGTTTCTTGCATGTTATAATGGGGATCATGGTGTTAACCCTAGGACAAGATTTGCCTGATGGTAACCTTGGTAGCTTGCAAAAGAAGGGGGATGTTTCCAAAGACAAATTCTCAAAGGTGTTGTGGTATGCCATCACAAATTACAGGACATGGGTCTTTGCCCTTTTGTATGGTTACTCCATGGGAGTTGAACTTACCACTGACAACGTAATTGCCGAATATTTCTATGACAGGTTTAATCTGAAGCTACACACAGCTGGAATGATAGCAGCAACATTTGGAATGGCAAACATCATAGCACGGCCATTTGGTGGATACACATCTGATGTTGCAGCCCGGTTGTTTGGTATGAGGGGCAGGCTTTGGGCCCTATGGATCCTCCAAAGCCTTGGCGGTGTGTTCTGCATATGGCTGGGGCGGGCCAACTCTCTGCCAATAGCCATCGTGGCGATGATTCTCTTCTCCGTGGGAGCACAAGCCGCATGCGGCGCAACCTTCGGCATCGTCCCCTTCATCTCAAGAAGATCCCTTGGAATCATCTCAGGGCTCACCGGTGCAGGGGGCAACTTCGGTTCAGGGTTGACTCAGCTGGTTTTCTTCTCAACGAACCGGTTCTCGACGTCGGCCGGGCTGTCGTTGATGGGTGGCATGATTGTGGCATGCACTTTGCCGGTGACACTGGTTCATTTTCCTCAATGGGGTAGCATGTTTTTCCCTGCTTCAAAAGATGCACAGAAATGCACTGAAGAATACTATTACACTTCTGAATGGAATGAAGAAGAGAAGCAGAAGGGTTTGCACCAAGGTAGTCTTAAGTTTGCTGAGAATAGCAGATCTGAGAGAGGAAAGCGTACAAAAAGGTACCGAGTGTGA 1566 0.4962 MPEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTANFALPVDSEHKAKVFKIFSLANPHMRTFHLSWISFFTCFVSTFAAAPLIPIIRDNLNLTKVDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGFVNGTAAGWGNMGGGATQLIMPLVYEVIRKAGSTPFTAWRIAFFVPGFLHVIMGIMVLTLGQDLPDGNLGSLQKKGDVSKDKFSKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGMIAATFGMANIIARPFGGYTSDVAARLFGMRGRLWALWILQSLGGVFCIWLGRANSLPIAIVAMILFSVGAQAACGATFGIVPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTNRFSTSAGLSLMGGMIVACTLPVTLVHFPQWGSMFFPASKDAQKCTEEYYYTSEWNEEEKQKGLHQGSLKFAENSRSERGKRTKRYRV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0275 521 MobiDBLite consensus disorder prediction 491 521 - -
Amo13g0275 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Amo13g0275 521 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Amo13g0275 521 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Amo13g0275 521 MobiDBLite consensus disorder prediction 491 513 - -
Amo13g0275 521 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 516 - -
Amo13g0275 521 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Amo13g0275 521 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Amo13g0275 521 Gene3D MFS general substrate transporter like domains 264 467 IPR036259 -
Amo13g0275 521 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0275 Amo-Chr13 3771354 3773799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0275 6 515 Inorganic Solute Cotransporters AT5G60770 79.804 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0275 K02575 - gmx:100807710 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0275 13 3771354 3773799 Amo13g0275 13 3771354 3773799 ECH