Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0272 ATGGAAGAAATACAGTCTCAATCGGATGCATATCGGTCTTCTTCTTCATCAGCAAGTAGCCCGGCGAGTAGGGTGCCATCAAGTCACTTCTTCTACCTTAGAAAGCCGGGTTCTCTTCGACAACCAATCTCATTTGAGGACTCACCTGAATGGGAAGACACTGATGTTGAAGCTAGAGGTGATGAAGGAGGAGGAGACACTATCAATGTTGCAACCCCGGCTTCACCTTCGCTTTCTAAGCTCAACAGTGGTTCCTTGGCATCTCCATATGGTTCATATATATTGGAGGGTGCAGTTCTTCCTCATAAGATCGTTGGTGCTTCTGTTGTGTGGAGGGATTTGACTGTTACCATAAAGGGAAAAAGGAAGTACTCTGATAATGTTATTAAGAGTTCAACTGGTTATGCCTTACCTGGTACAATGACTGTGATTATGGGACCTGCTAAATCAGGGAAATCGACGTTGTTACGCGCCATTGCAGGAAGATTGCATCCTTCAACCAGGACTTATGGTGAAGTGTTTGTGAATGGGGCGAAATCGCACTTGTCCTATGGATCATATGGTTTTGTGGAGAGAAAGACCAATCTGATTGGATCACTCACTGTGAGAGAGTTTCTGTACTATTCAGCTCTGCTTCAACTCCCAGGATTCTTATTTCAGAAAAAGAATGTGGTAGAGGAAGCTATCCAAGCAATGTCTTTAGGTGATTATGCAAACACACTTATTGGTGGACATTGTTATTCAAAGGGCCTCTCCGGGGGCGAGAGAAGACGTGTTAGCATTGCGAGGGAGCTTGTGATGAGACCACAAATCCTGTTTATAGATGAACCTCTTTATTGTCTGGACAGTGTCTCAGCACTTTTGATGATGGTTACATTGAAGAAACTTGCAAGCAGTGGCTGCACTCTTATTTTTACTATTTACCAGAGCAGCACAGAAGTCTTCGGCCTTTTTGATCGAATATGCCTTCTTTCGAATGGAAATACTTTGTTCTTTGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCCTGCCCTATCATGCAAAGTCCTTCCGATCACTTTCTTCGAGCAATCAATACAGATTTTGACAGGATAATTGCAATGTGTAAAAACTGGCAGGATGATAATGGAGACTTTTCTTCGGTCAACATGGACACAGCAGTGGCTATTTGCACACTTGAAGCAACATATAAATCATCTGCAGATGCAGCTGCTGTTGAAAATATGGTTATGAAACTCACAGAGAAGGAAGGTCCATCTCTTAAATACAAAGGCAAAGCTAGTGCTGCTACTCGCATAGCAGTCTTGACATGGAGGTCTTTATTGGTTATGTCAAGGGAGTGGAAATATTACTGGATTCGTCTGGTTCTCTGTATGCTTCTTACACTTTGCATTGGTACTATATTTTCCGGCTTGGGGCACTCGCTTTCTTCAGTTGGGACTAGAGTTACAGCAATTTTTGTATTTGTATCATTCTATTCGCTTCTAAGCATTGCTGGCGTGCCTGGACTTATTAAAGAAATCAAGATGTATGAATGTGAAGAATCTAACCAGCATTCAAGTGCACTAGTATTTTTACTTGGACAATTCTTGTCCAGCATGCCATTCCTTTTCCTCATCTCCATTTCATCAAGTCTAGTTTTCTACTTCCTAGTAGGGCTGAGAGATGAATTCAACTTCTTAATGTACTTTGTGCTCAACATTTTCATGTCTCTTTTAGCAAGTGAAGCACTTATGCTACTTGTTGCTACTTTATGGCAAGATATCTTCTGGAGTTTCTTAACAACTTTGTGCATTCAGGTAGTGATGATGCTTTCCGCCGGATATCTTAGAATCCGAAATGATTTGCCTGGACCAGTGTGGATATATCCAATGTCATATATATCCTTTCATACATACTCTATTCAGGGTCTATTGGAGAATGAGTACCTAGGAAGTACCTTTTCAATTGGGGAGGTGAGGACCATATCAGGATTTCAAGCTCTCCAAAACATCTATGACATCTCTTCTGACACCAATTCAAAGTGGTCAAATTTGCTGGTTTTGTTTCTCATGGCAGTTGTTTATCGTTTTCTTGTGTTCATTTTATTATGCAGAAAATCATCTCTGCTTATTAGTTGTAGGTGTCAAAGAGTAGGTACAGAATTTACTAGTTGA 2172 0.4111 MEEIQSQSDAYRSSSSSASSPASRVPSSHFFYLRKPGSLRQPISFEDSPEWEDTDVEARGDEGGGDTINVATPASPSLSKLNSGSLASPYGSYILEGAVLPHKIVGASVVWRDLTVTIKGKRKYSDNVIKSSTGYALPGTMTVIMGPAKSGKSTLLRAIAGRLHPSTRTYGEVFVNGAKSHLSYGSYGFVERKTNLIGSLTVREFLYYSALLQLPGFLFQKKNVVEEAIQAMSLGDYANTLIGGHCYSKGLSGGERRRVSIARELVMRPQILFIDEPLYCLDSVSALLMMVTLKKLASSGCTLIFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSSVNMDTAVAICTLEATYKSSADAAAVENMVMKLTEKEGPSLKYKGKASAATRIAVLTWRSLLVMSREWKYYWIRLVLCMLLTLCIGTIFSGLGHSLSSVGTRVTAIFVFVSFYSLLSIAGVPGLIKEIKMYECEESNQHSSALVFLLGQFLSSMPFLFLISISSSLVFYFLVGLRDEFNFLMYFVLNIFMSLLASEALMLLVATLWQDIFWSFLTTLCIQVVMMLSAGYLRIRNDLPGPVWIYPMSYISFHTYSIQGLLENEYLGSTFSIGEVRTISGFQALQNIYDISSDTNSKWSNLLVLFLMAVVYRFLVFILLCRKSSLLISCRCQRVGTEFTS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0272 723 MobiDBLite consensus disorder prediction 1 26 - -
Amo13g0272 723 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524
Amo13g0272 723 Gene3D - 105 346 IPR027417 -
Amo13g0272 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 109 351 IPR003439 GO:0005524
Amo13g0272 723 SMART AAA_5 138 328 IPR003593 -
Amo13g0272 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 705 - -
Amo13g0272 723 Pfam ABC-2 type transporter 438 648 IPR013525 GO:0016020|GO:0140359
Amo13g0272 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 345 IPR027417 -
Amo13g0272 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 3 16 705 - -
Amo13g0272 723 Pfam ABC transporter 138 278 IPR003439 GO:0005524
Amo13g0272 723 MobiDBLite consensus disorder prediction 40 76 - -
Amo13g0272 723 CDD ABCG_EPDR 106 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0272 Amo-Chr13 3751415 3754890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0272 136 312 Calmodulin-binding Proteins AT2G36910 25.668 4.63e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0272 - - jcu:105628040 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0272 13 3751415 3754890 Amo13g0272 13 3751415 3754890 ECH