Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0259 ATGGCACCTTTCTCTTCTCTCGCCACAACCTTATACCGCTTTCCCCTTCACCGATTCATCGCCAAACCCCAATTTTTCCTCTCTCCCAATTCAATCCCTTTCCAACTCTCACATACCCACAAACCAAAGAAATTCAGTGGGTTTCGTCTGTTCTCAATGGCTTCGGAACCGAAGGAGTTACCAGCTAACAACCCTGGTCTTACTGCTACCCCTGACCCAGCTACTAAGGGTTACTTCATGCAGCAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCGTTGCTTAAGAGATTGGACTTTCCAGAAATGAAGTTCAGCTTATACTTTATGGGTTATGAGAATACGGCAGAAGCTCCCGGTAATCCAGTTGATAGAACAGTTTGGACGTTTTCTCAGAAGGCTACGATTGAATTGACACATAATTGGGGTACCGAAAGTGATCCAGAGTTCAAAGGATACCACAATGGAAATTCTGAACCTCGTGGCTTTGGGCACATTGGGATAACCGTCGATGACACCTACAAGGCATGTGAAAGATTTCAGAGTCTAGGAGTCGAGTTTGTTAAGAAGCCAGATGATGGGAAAATGAAAGGCATAGCCTTTATCAAGGATCCTGATGGTTACTGGATTGAAATATTTGACCAAAAAACAATTGGAACTGTAACACAAGCTGGTTCTTAA 714 0.4328 MAPFSSLATTLYRFPLHRFIAKPQFFLSPNSIPFQLSHTHKPKKFSGFRLFSMASEPKELPANNPGLTATPDPATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPGNPVDRTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFQSLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDQKTIGTVTQAGS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0259 237 Gene3D - 58 233 IPR029068 -
Amo13g0259 237 TIGRFAM glyox_I: lactoylglutathione lyase 68 231 IPR004361 GO:0004462|GO:0046872
Amo13g0259 237 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 46 234 - -
Amo13g0259 237 CDD GlxI_Zn 80 224 - -
Amo13g0259 237 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 79 226 IPR037523 -
Amo13g0259 237 PANTHER LACTOYLGLUTATHIONE LYASE 46 234 - -
Amo13g0259 237 ProSitePatterns Glyoxalase I signature 2. 167 183 IPR018146 GO:0004462|GO:0046872
Amo13g0259 237 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 69 225 IPR029068 -
Amo13g0259 237 ProSitePatterns Glyoxalase I signature 1. 82 103 IPR018146 GO:0004462|GO:0046872
Amo13g0259 237 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 82 223 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0259 Amo-Chr13 3648010 3666856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0259 15 233 Calmodulin-binding Proteins AT1G08110 74.429 2.10e-114 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0259 13 3648010 3666856 Amo13g0259 13 3648010 3666856 ECH