Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo13g0248 | ATGATGATGATGATGGAATTCCAGAACCGCAGAGTGCTACTACTCCTCAACAAGGATGTTCCAATATCTTCACCGCCGCCGCCGCAGCCGCCAGCGTCGTCATCACCGGTGATGGCGATGTATGGATCATCGTCATTGCAAGTACCAGCTCGTCCGATCTTCAGTTCAAACGTAGCCTACGCCTTCATCATCCTCCTCACCACGCTGTTCTTCCTGGCCTTCATCCTCCTCTTCCTCCGCCAATTCTCGTCGTCCGGCAGCAGAAGCCGTTGCTCGGAGGAAACGACGGAGAAGTGGGCGCTGCCGACAGTTGCGTACAGTAGGGGGAAGAGGAAGGTGAAAGAGCAGGAAGAGGAGTGCGTGATATGTTTGGAAGAGCTTCGCGAGGGTGAAACGGTAAAAATGATACCTCACTGCAAGCACGTGTTCCATCCTAACTGCATTGACACGTGGCTCCTCACTCACGTGACATGCCCCGTGTGCAGATGCCCCAAGTTACAAGAGTCTCAAACTGAAAGAGCGGTGAGTAGTGATGAGAGAAGAGAAGTAACTGGGTTGAGGAGATCACTCAGCTTCTGA | 579 | 0.5302 | MMMMMEFQNRRVLLLLNKDVPISSPPPPQPPASSSPVMAMYGSSSLQVPARPIFSSNVAYAFIILLTTLFFLAFILLFLRQFSSSGSRSRCSEETTEKWALPTVAYSRGKRKVKEQEEECVICLEELREGETVKMIPHCKHVFHPNCIDTWLLTHVTCPVCRCPKLQESQTERAVSSDERREVTGLRRSLSF* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo13g0248 | 192 | PANTHER | RING FINGER DOMAIN-CONTAINING | 54 | 165 | - | - | |
Amo13g0248 | 192 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 162 | IPR001841 | - | |
Amo13g0248 | 192 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL6 | 54 | 165 | - | - | |
Amo13g0248 | 192 | SMART | ring_2 | 120 | 161 | IPR001841 | - | |
Amo13g0248 | 192 | Pfam | Ring finger domain | 119 | 162 | IPR001841 | - | |
Amo13g0248 | 192 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 166 | IPR013083 | - | |
Amo13g0248 | 192 | SUPERFAMILY | RING/U-box | 114 | 166 | - | - | |
Amo13g0248 | 192 | CDD | RING-H2_PA-TM-RING | 119 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo13g0248 | Amo-Chr13 | 3510506 | 3511153 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo13g0248 | 54 | 166 | C3H Transcription Factor Family | AT2G27940 | 36.879 | 1.48e-25 | 97.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo13g0248 | - | - | aip:107634124 | 309.301 |