Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0232 ATGATGGTGGCAAAGGATAATAATCACCAAGGGTATCATGGTAATTTCGCAAAGCAATTTCACAAGGGTAAATGGTTCATGGTGTTTGGTTCATCATTGATATTATCATGTGCTGGTGSCTCTTACATGTTTGGTATGTATTCAAAGGATCTTAAGGCAACATTAGGATATGACCAAACTACCCTCAACACAATAGGTTTCTTCAAGAACCTAGGTGCAAACAGTGGCATAATCTCAGGGCTAATTGCTGAAATTACACCAACATGGATGATTCTTCTCATTGGAGCTGTCACAAACTTTGTTGGTTACTTCATGGTTTGGCTCTCAATAACACAGAAGATTCCAAAGCCTGAGGTTTGGCAAATGTGTCTCTACTTTGTGATTGGAACACATTCTCAGAATTTTGCAGCAACATCAGTGATGATCTCATGTGTCAACACATTCCCTCTCAACAGAGGAATTGTTGTTGGATTCTTGCAGAGTTTTGTTGGTTTGAGTGCAGCTATAATCTCACAATTCCATAAGACTATTATTGCTTCTTGTTCAGTTCATTATTATTATCAAGATACAAGGTCTATTGTTCTTGRTCTTGCTGTTTTTCCAGCTATTGTGTCAATTCTCTTTGCATTCACAATTAGAGGCTTTGAGCCTTCAACACAATTCAATGACACTAGACCCTTTTTTCATTTCTTTTACATTGCCACTGGTCTTGCAACTTTCATCTTGGGTATCACCATTACTCACTTGTTTGAATGTCATCTTTCAAAGTTTGCATATCATTTGATTGCATTTCTAATGTTTCTGTTCTTGCTTGTCCTGCCTCTCTTTGTTGCCATAAGAGAGGATCTGTTCTTATGGAAACTTGCTGAGGCTGAGAGTGAGAATCTCAATGTCATCATTGAGAATCAAGAGAATGATAATAATAACAATAAGGCAGAGCCAACAACATCAACATCAATGTATTCTTGTTTTAAAAGCATATTGAATAAGCCTGAAAGAGGAGAAGATCACACAATATTACAAGCACTTTTAAGTGTTGACATGTTTCTGATATTCTTTGTTTCAATATGTGGGCTTGGTGCTAATTTGGCAGCAATTGACAACCTTGGACAGATTGGTGAATCTTTAGGGTACTCAAAGGTTAAAACTCAGTATTTTGTATCTCTAGTAAGTGTATGGAACTTCTTTGGGAGAGTTTTTTCTGGTTTTGCATCTGAGGCATTGTTAGGACTATACAAGTTACCTAGGCCATGGTTGGTAACAATTTCTCTATTCATCTCAGTGATTGGTCATGTTGCAATTGTGCTTAGCAATGACAGTGGACTATACATAGCAAGCTGCATAATTGGATTCTGCTTTGGTGCTCAAATTCCATTGATTTCTGCCACAATTTCTGAGATTTTTGGCCTAAAACACTATGGTGCATTGCTGAATTATTGGCACCTAGGGAGCCCTATAGGTTCTTATTTGATGAATGTGTTGGTTGGTGGGACCTTATATGATGCAGAGGCTAAGAACCAACTTAAGAAAATTGATCATAGTTTTAGTTTGAATGAGGAGCTGGGAGAATTAGTATGCTTTGGAATAGATTGTTATAATTTCACTTTTGTCATTTTTGCCACTATCATACTCTTAGGTGCCTTTGCTTCTCTTGTTTTGGTGAAGAGAACAAGTGAATTCTACAAGGGTGATATATACAAGAAGTTTAGAGAGAATCATAAACAACAACATATTGTATGGTTGTAG 1746 0.3694 MMVAKDNNHQGYHGNFAKQFHKGKWFMVFGSSLILSCAGXSYMFGMYSKDLKATLGYDQTTLNTIGFFKNLGANSGIISGLIAEITPTWMILLIGAVTNFVGYFMVWLSITQKIPKPEVWQMCLYFVIGTHSQNFAATSVMISCVNTFPLNRGIVVGFLQSFVGLSAAIISQFHKTIIASCSVHYYYQDTRSIVLXLAVFPAIVSILFAFTIRGFEPSTQFNDTRPFFHFFYIATGLATFILGITITHLFECHLSKFAYHLIAFLMFLFLLVLPLFVAIREDLFLWKLAEAESENLNVIIENQENDNNNNKAEPTTSTSMYSCFKSILNKPERGEDHTILQALLSVDMFLIFFVSICGLGANLAAIDNLGQIGESLGYSKVKTQYFVSLVSVWNFFGRVFSGFASEALLGLYKLPRPWLVTISLFISVIGHVAIVLSNDSGLYIASCIIGFCFGAQIPLISATISEIFGLKHYGALLNYWHLGSPIGSYLMNVLVGGTLYDAEAKNQLKKIDHSFSLNEELGELVCFGIDCYNFTFVIFATIILLGAFASLVLVKRTSEFYKGDIYKKFRENHKQQHIVWL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0232 581 Gene3D MFS general substrate transporter like domains 346 579 IPR036259 -
Amo13g0232 581 Pfam Nodulin-like 24 279 IPR010658 -
Amo13g0232 581 Pfam Major Facilitator Superfamily 349 554 IPR011701 GO:0022857|GO:0055085
Amo13g0232 581 Coils Coil 293 313 - -
Amo13g0232 581 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 10 576 - -
Amo13g0232 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 576 - -
Amo13g0232 581 SUPERFAMILY MFS general substrate transporter 20 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0232 Amo-Chr13 3285577 3287330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0232 15 576 Nodulin-like Gene Family AT2G28120 49.030 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0232 - - aip:107632379 1117.83