Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0216 ATGATGGTGGCAAAGGATAATAATCACCAAGGGTATCATGGTAATTTCGCAAAGCAATTTCACAAGGGTAAATGGTTCATGGTGTTTGGTTCATCATTGATATTATCATGTGCTGGTGGCTCTTACATGTTTGGTATGTATTCAAAGGATCTTAAGGCAACATTAGGATATGACCAAACTACCCTCAACACAATAGGTTTCTTCAAGAACCTAGGTGCAAACAGTGGCATAATCTCAGGGCTAATTGCTGAAATTACACCAACATGGATGATTCTTCTCATTGGAGCTGTCACAAACTTTGTTGGTTACTTCATGGTTTGGCTCTCAATAACACAGAAGATTCCAAAGCCTGAGGTTTGGCAAATGTGTCTCTACTTTGTGATTGGAACACATTCTCAGAATTTTGCAGCAACATCAGTGATGATCTCATGTGTCAACACATTCCCTCTCAACAGAGGAATTGTTGTTGGATTCTTGCAGAGTTTTGTTGGTTTGAGTGCAGCTATAATCTCACAATTCCATAAGACTATTATTGCTTCTTGTTCAGTTCATTATTATTATCAAGATACAAGGTCTATTGTTCTTGTTCTTGCTGTTTTTCCAGCTATTGTGTCAATTCTCTTTGCATTCACAATTAGAGGCTTTGAGCCTTCAACACAATTCAATGACACTAGACCCTTTTTTCATTTCTTTTACATAGCCACTGCTCTTGCAACTTTCATCTTGGGTATCACCATTACTCACTTGTTTGAATGTCATCTTTCAAAGTTTGCATATCATTTGATTGCATTTCTAATCTTTCTGTTCTTGCTTGTCCTGCCTCTCTTTGTTGCCATAAGAGAGGATCTGTTCTTATGGAAACTTTCTGAGGCTGAGAGTGAGAATCTCAATGTCATCATTGAGAATCAAGAGAATGATAATAATAACAATAAGGCAGAGCCAACAACATCAACATCAATGTATTCTTGTTTTAAAAGCATATTGAATAAGCCTGAAAGAGGAGAAGATCACACAATATTACAAGCACTTTTAAGTGTTGACATGTTTCTGATATTCTTTGTTTCAATATGTGGGCTTGGTGCTAATTTGGCAGCAATTGACAACCTTGGACAGATTGGTGAATCTTTAGGGTACTCAAAGGTTAAAACTCAGTATTTTGTATCTCTAGTAAGTGTATGGAACTTCTTTGGGAGAGTTTTTTCTGGTTTTGCATCTGAGGCATTGTTAGGACTATACAAGTTACCTAGGCCATGGTTGGTAACAATTTCTCTATTCATCTCAGTGATTGGTCATGTTGCAATTGTGCTTAGCAATGACAGTGGACTATACATAGCAAGCTGCATAATTGGATTCTGCTTTGGTGCTCAAATTCCATTGATTTCTGCCACAATTTCTGAGATTTTTGGCCTAAAACACTATGGTGCATTGCTGAATTATTGGCACCTAGGGAGCCCTATAGGTTCTTATTTGATGAATGTGTTGGTTGGTGGGACCTTATATGATGCAGAGGCTAAGAACCAGCTTAGGAAAATTGATCATAGTGTTAGTTTGAATGAGGAGGTGGGAGAATTAGTATGCTTTGGAATGGATTGTTATAATTTCACTTTTGTCATTTTTGCCACTATCATACTCTTAGGTGCTTTTGCTTCTCTTGTTTTGGTGAAGAGAACAAGTGAATTCTATAAGGGTGATATATACAAGAAGTTTAGAGAGAATCATAAACAACAACATATTGTATGGTTGTAG 1746 0.3706 MMVAKDNNHQGYHGNFAKQFHKGKWFMVFGSSLILSCAGGSYMFGMYSKDLKATLGYDQTTLNTIGFFKNLGANSGIISGLIAEITPTWMILLIGAVTNFVGYFMVWLSITQKIPKPEVWQMCLYFVIGTHSQNFAATSVMISCVNTFPLNRGIVVGFLQSFVGLSAAIISQFHKTIIASCSVHYYYQDTRSIVLVLAVFPAIVSILFAFTIRGFEPSTQFNDTRPFFHFFYIATALATFILGITITHLFECHLSKFAYHLIAFLIFLFLLVLPLFVAIREDLFLWKLSEAESENLNVIIENQENDNNNNKAEPTTSTSMYSCFKSILNKPERGEDHTILQALLSVDMFLIFFVSICGLGANLAAIDNLGQIGESLGYSKVKTQYFVSLVSVWNFFGRVFSGFASEALLGLYKLPRPWLVTISLFISVIGHVAIVLSNDSGLYIASCIIGFCFGAQIPLISATISEIFGLKHYGALLNYWHLGSPIGSYLMNVLVGGTLYDAEAKNQLRKIDHSVSLNEEVGELVCFGMDCYNFTFVIFATIILLGAFASLVLVKRTSEFYKGDIYKKFRENHKQQHIVWL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0216 581 SUPERFAMILY MFS general substrate transporter 21 214 IPR036259 -
Amo13g0216 581 Gene3D MFS general substrate transporter like domains 346 579 IPR036259 -
Amo13g0216 581 Coils Coil 293 313 - -
Amo13g0216 581 Pfam Major Facilitator Superfamily 349 554 IPR011701 GO:0022857|GO:0055085
Amo13g0216 581 Pfam Nodulin-like 24 279 IPR010658 -
Amo13g0216 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 576 - -
Amo13g0216 581 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 10 576 - -
Amo13g0216 581 SUPERFAMILY MFS general substrate transporter 229 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0216 Amo-Chr13 3113784 3115529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0216 15 576 Nodulin-like Gene Family AT2G28120 49.383 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0216 - - aip:107632379 1114.75