Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0201 ATGGCTGGGATTTGTTGTGGTGTTGTTGGTGACGGAGAGAATCCAGCTACAATTGAGCCAACTTCTTCACGGCCTTTAGCTCGCCGGAGTTTGGACCTCCTGCCGTTGAAATACATTGCCGACATGGCGGTTCCGCCKCCCGARGGCAGCCGTAAGCGGCAGAAGCTGGATCTCTCTGCCTCTCCGGCGAGGGAGTGCGAGAACGCAGTTGAGAGTTCCAAATCAAACCCTAGTAAACTCAAAGAAGAGCTTAACATCAAGAAGGAATCAACAAATCACGAAGCAAGTAGYAGTTCGGAAGTACCAACGTTAATTTCTAAGGAGAAAAAWGAGGTTGTTGAAGAGTGTCCCAAGTACGGAGTCACATCGGTATGTGGCAGGAGGAGGGACATGGAAGACGCAGTTTCGGTGCGTCCCTCCTTCTGCCAAGTTCAAAACGGCACAAACACAAACGATCAAAACGACGTGCCCTTTCACTTCTTTGGTGTATATGACGGTCATGGATGTTCACATGTTGCAACTATGTGCAAGGAGAGGCTTCACGGGATTGTGAAGGATGAGATTGGAAAATCTCAAGAGAACTTTGAATGGAAATCCGCCATGGAGAAAAGCTTCACTCGCATGGATGACGAGGTTCAAAGCTGGAGCCATAGCAATCAAACCTCCACCTGCAGGTGCGAGCTCCAAAAACCTCACTGCGACGCCGTCGGCTCCACTGCCGTCGTCGCCGTTGTCACGCCGGAGAAAATCATCGTCTCCAACTGCGGCGACTCTCGCGCCGTACTCTGCCGCAACGGTGTCGCCATCCCCCTCTCCAGTGATCACAAGCCGGACCGACCGGACGAGTTGCTCCGAGTCCAAAACGCCGGTGGGCGCGTGATCTATTGGGACGGTCCAAGAGTGCTTGGGGTGCTGGCCATGTCAAGAGCCATAGGTGATAACTATTTGAAGCCTTATGTGATTTCGGAACCGGAGGTGACTGTTACGGATCGGAGTGAGGAGGATGAGTGTTTGATTCTGGCGAGTGATGGGCTTTGGGATGTTGTTTCTAACGACACGGCGTGTGGGGTGGTCAGGATGTGTCTGAAGGCGCAGAAGCTGCCGTCGCCGCCGGGGTCTCCGGGGAGGGATGTGGCGGCGGATGGATCCGACAAGGCGTGCTCCGATGCTTCGATTCTTCTGACGAAGCTGGCTTTGGCGAGGCACAGCTCCGACAATGTTAGCGTGGTGGTGGTTGATTTGAGGAGGGATCAACGTCAACAACAAAGTTGA 1272 0.533 MAGICCGVVGDGENPATIEPTSSRPLARRSLDLLPLKYIADMAVPPPEGSRKRQKLDLSASPARECENAVESSKSNPSKLKEELNIKKESTNHEASSSSEVPTLISKEKXEVVEECPKYGVTSVCGRRRDMEDAVSVRPSFCQVQNGTNTNDQNDVPFHFFGVYDGHGCSHVATMCKERLHGIVKDEIGKSQENFEWKSAMEKSFTRMDDEVQSWSHSNQTSTCRCELQKPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQNAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRSEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSPPGSPGRDVAADGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQQQS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0201 423 ProSiteProfiles PPM-type phosphatase domain profile. 118 414 IPR001932 -
Amo13g0201 423 MobiDBLite consensus disorder prediction 41 103 - -
Amo13g0201 423 CDD PP2Cc 118 367 IPR001932 -
Amo13g0201 423 SUPERFAMILY PP2C-like 116 415 IPR036457 -
Amo13g0201 423 SMART PP2C_4 106 412 IPR001932 -
Amo13g0201 423 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Amo13g0201 423 MobiDBLite consensus disorder prediction 76 94 - -
Amo13g0201 423 Pfam Protein phosphatase 2C 118 406 IPR001932 -
Amo13g0201 423 Gene3D - 105 423 IPR036457 -
Amo13g0201 423 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 25 420 - -
Amo13g0201 423 PANTHER ALPHABET, ISOFORM E-RELATED 25 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0201 Amo-Chr13 2491355 2494119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0201 96 421 PP2C-type Phosphatase Gene Family AT1G07430 60.745 1.28e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0201 K14497 - gmx:100776356 560.451