Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0173 ATGGAGGAGGGGCTGTTTGTCACGGCGGTTGGACTACTGGTGGTGGCGGTGGGCGGATGGAAGCTGCTGAACTGGCTCTTCCTGAGGCCTAAGAAGCTTGAGACCCTTCTCAGGGAGCAAGGCTTCCATGGCAACCCCTACACCCTCTTCTCCAACAACAACAACAACTCTTCTGTTAGCATGAAGCCAATGACTCTCTCTGATGACAAGGACATAGCTCCACGTGTTTATTCTCAAGCCGATCATGCTATCATCAAATTTGGCAAGAATTCATTTTATTGGGAAGGTCAGACACTGAAGGTCAACATCACAAACCCTGAGCATATTAAACAAGTTTTTACCAATAACCGTTACTTCAAGAAAGAGAAGCCTAAGCTAGGCCGTCTGGCCAAGTTATTGGGCTCTGGACTTCCAAATTATGAGGACCAACAATGGCACACACATCGAAAGATCATCAACCCTGCTTTCCATATGGAGAAATTGAAAGTTCTAACATCAACAATGGTCCAATGCTGCCATGATGTGATTCATAAATGGGAGGAGATGCTGTCTTCAGAGGGTAAATGCGACATTGATGTGGAGCCTTTCATCCAGAATTTGGCTTGCGATGTTATTTCCAGAACAGCCTTTGGAAGCAGTTACCAAGAAGGAAAAAGAATATTTGAACTCCTTACTAAGCAAGCTAGACTTATAATGAGACTAAAACATATTCACATTCCAGGATGGTGGTTGCTTCCTACTAGTGTTAATAGGACATCACTTGAAGCTATCATCAGGAAAAGAGAGAAAGCAATGAAGGATGGTGAGGAGGTTAACAAGAGTGACTTATTAGGGATACTTTTGGAATCAAACAGCAAAGAAATAAAAGAACATGGAATGAGTAATCGAGAGATAGTGGAAGAATGCAACACATTTTACTTAGCAGGACAAGAAACCACGGCTGTTTTGATAGTATGGACAATGGTGATGCTAAGTAGGTATCCAGAATGGCAATCACGTGCGAGGGAAGAAGTCTTCCAAGTCTTTGGCAACCGAAAGCCAGACAGTGATGGCCTGAATCGCCTTAAAACCGTATCAATGATCTTAAATGAGGTGTTAAGGCTATACCCACCAACCCTGTTTTTCAGTCGAACACTCCACAAAGATATAAAGATGGAAAACCTATCACTACCTGCCGGAGTTAAAGTTACATTACCAATACTTATGATCCACCATGATCGTGAGCTATGGGGTGATGATGCAAGAGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTGCTAAAGCGACTAAAGGTCGGGTCTCATATTTTCCATTTGGATGGGGGCCTAGAATGTGCATCGGCCAAAATTTCTCCTTAATGGAAGCAAAGATATTCTTCACATTGCTTTTACAACGCTTCACATTTGAGCTCTCCCCTGCATATACACATGCTCCGGTCAATTTCCTTAATCTTAAACCAATGCGTGGAGCTCAAATCGTCTTACATAAATTGTAG 1497 0.4262 MEEGLFVTAVGLLVVAVGGWKLLNWLFLRPKKLETLLREQGFHGNPYTLFSNNNNNSSVSMKPMTLSDDKDIAPRVYSQADHAIIKFGKNSFYWEGQTLKVNITNPEHIKQVFTNNRYFKKEKPKLGRLAKLLGSGLPNYEDQQWHTHRKIINPAFHMEKLKVLTSTMVQCCHDVIHKWEEMLSSEGKCDIDVEPFIQNLACDVISRTAFGSSYQEGKRIFELLTKQARLIMRLKHIHIPGWWLLPTSVNRTSLEAIIRKREKAMKDGEEVNKSDLLGILLESNSKEIKEHGMSNREIVEECNTFYLAGQETTAVLIVWTMVMLSRYPEWQSRAREEVFQVFGNRKPDSDGLNRLKTVSMILNEVLRLYPPTLFFSRTLHKDIKMENLSLPAGVKVTLPILMIHHDRELWGDDAREFKPERFSEGIAKATKGRVSYFPFGWGPRMCIGQNFSLMEAKIFFTLLLQRFTFELSPAYTHAPVNFLNLKPMRGAQIVLHKL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0173 498 PANTHER CYTOCHROME P450 72A11-RELATED 29 487 - -
Amo13g0173 498 Gene3D Cytochrome P450 74 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 487 - -
Amo13g0173 498 Pfam Cytochrome P450 86 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 SUPERFAMILY Cytochrome P450 85 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0173 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0173 Amo-Chr13 2150647 2152488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0173 9 498 Cytochrome P450 AT3G14690 47.929 5.95e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0173 - K17873 gmx:100781923 611.298