Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0171 ATGGAGATGCTGCATATCATGACTACTTCAGCCATGTCCACAGCCCTCTTCCTCTCCTTCTTTACTTTTACACTCTTTTTCTCTGTCTTCTCATTTCTCCTATTCATTTCTAGGATCAAGCCATGGTGTAATTGTGATACGTGTCGCACTTACCTTAATATTTCTTGGATTGCTCATTTTCCAAATCTCTGCGACTGGTACACTCACCTTCTTCGTGCTTCACCTACCGGAACTATCCACCTCCACGTCCTCAATAACACTATTACCTCCAATCCTAATAACGTTCAGCACATTCTCAAAACCAAGTTCCACAATTATCCTAAGGGCACACCTTTTTCTACTCTCCTTGGCGACCTTCTTGGCAACGGAATCTTCAACTCCGATGGCCATTCCTGGCAATTCCAGCGCAAGATGGCCAGCCTCGAGCTCGGCAGCGTCGCCATTCGCTCCTATGCCCTCCAAATCGTCAACCAAGAGATCCAAACCAGGCTGATTCCTCTCCTCCAATCGGTTTCCAATCAGCAAGATAAATTGTTGGACATTCAAGATATTTTTAGAAGATTTTCTTTTGACATTATTTGTAAATTTTCATTTGGAATGGATCCTGAGTGTCTCATTTCTTCTTTGCCGGAATCTAAACTGGCAGACAGCTTTGACCTTGCATCTAAACTCTCTGCAGAGCGAGCAATGTCACCGTCGCCGCTCATATGGAAGATGAAACGATTACTCAATATTGGTTCGGAGAAAAAACTGAAAGAAGCCATTGGAATAGTAGACAATGTGGCCATGGACATCATAAGACAGAGAAGGAGAGAGATGATGACTATGGCGAGTTTAAACAAATCGGATTTACTGTCTAGATTTATGGAAACTATTGAAGATGACAAATACTTGAGAGACATAGTTATCAGTTTCTTGCTGGCGGGTCGGGACACAATCGCAGCAGCGTTGACTGGATTTTTCATTCTGCTTTCGAAGAACCCGCATGTGGGGTCAACCATCCGGCAGGAGCTGGAGCGGGTGATGGAAGCGGATCAGGAATTGCCGACCTTTGAGCAAATGAGGAGCATGCATTACCTGAATGGAGCGCTTCACGAGAGCATGAGGCTGTTCCCTCCGGTTCAGTTTGATTCAAAGTATGCTCAAGAAGATGACGTCTTGCCAGATGGCACTTTTGTCAGGAGAGGGAGTCGGGTCACTTACCACCCCTATGCAATGGGTCGGATGGACACTATTTGGGGCCCCGATTCCGATCAGTTTCGACCCGAAAGGTGGTTGAATACAGATGGTGTTTTTGTTCAGCAGTGTCCCTTTAAGTACCCGGTTTTTCAAGCCGGGGTGAGAGTCTGTTTGGGAAAAGACTTGGCCTTGATGGAGATCAAGTCCATTGCCGCTGCCATTCTCCGCCGCTTTGATGTCCGGGTTGTTGGGCCTAATACGGAGCCCTGCTTCGCTCCAGGCCTTACTGCCACTGTGCGGGGCGGGTTGCCGGTTCAAGTTACCCAAAGGTGTTGA 1515 0.4693 MEMLHIMTTSAMSTALFLSFFTFTLFFSVFSFLLFISRIKPWCNCDTCRTYLNISWIAHFPNLCDWYTHLLRASPTGTIHLHVLNNTITSNPNNVQHILKTKFHNYPKGTPFSTLLGDLLGNGIFNSDGHSWQFQRKMASLELGSVAIRSYALQIVNQEIQTRLIPLLQSVSNQQDKLLDIQDIFRRFSFDIICKFSFGMDPECLISSLPESKLADSFDLASKLSAERAMSPSPLIWKMKRLLNIGSEKKLKEAIGIVDNVAMDIIRQRRREMMTMASLNKSDLLSRFMETIEDDKYLRDIVISFLLAGRDTIAAALTGFFILLSKNPHVGSTIRQELERVMEADQELPTFEQMRSMHYLNGALHESMRLFPPVQFDSKYAQEDDVLPDGTFVRRGSRVTYHPYAMGRMDTIWGPDSDQFRPERWLNTDGVFVQQCPFKYPVFQAGVRVCLGKDLALMEIKSIAAAILRRFDVRVVGPNTEPCFAPGLTATVRGGLPVQVTQRC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0171 504 PANTHER CYTOCHROME P450 94C1 18 500 - -
Amo13g0171 504 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 Pfam Cytochrome P450 78 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 Gene3D Cytochrome P450 57 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PANTHER CYTOCHROME P450 18 500 - -
Amo13g0171 504 SUPERFAMILY Cytochrome P450 61 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0171 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0171 Amo-Chr13 2130806 2132525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0171 33 503 Cytochrome P450 AT2G27690 60.797 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0171 K20624 - gmx:100813091 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0171 13 2130806 2132525 Amo13g0171 13 2130806 2132525 ECH
Amo18g0638 18 8826346 8828272 Amo13g0171 13 2130806 2132525 ECH