Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0168 ATGGATCCACCTCCAAGTAGTCTCGGCGAAGCAAAAGCAGAAGCACTCCATCATTATAGTAAAAGCTTTAGAGGCTTCTCGGCCATGCTTACTCCAGAGCAAGCTAATCAACTTCAAGAACATGAATCAGTGGTATCAGTTTTTGAGAGCAAACTGAATAGGCTCCACACAACACATTCTTGGGATTTTCTTGGATTAAACTCTGCCTACACAGGAAGCCATGTGGCACTGGATTGGGCATCGGATGTCATCGTTGGTGTGGTTGACTCTGGTGTTTGGCCAGAATCAGAAAGCTTCAGAGATTATGGATTAGGCCCTGTGCCTGAGAGATTCAAGGGAGAGTGTGTGACTGGTGATAATTTCACACTAGCCAATTGCAACAAGAAAATCATTGGTGCCAGGTTCTATTCAAAAGGTTTTGAAGCAGACGTTGGTCCATTGGAAGACGTGGTTAACAGGCAATACTTCCGGTCACCACGAGACAGTGATGGACATGGAAGTCACACAGCCTCCACCATAGCAGGATCCATTGTTGCTAATGCCAGTTTACTTGGCATAGGCAGAGGAACTGCGAGAGGTGGCGCGGCAAATGCAAGGCTTGCCATCTACAAGGCCTGTTGGTTTGGATACTGCAGCGATGCAGATATCCTGTCTGCCATGGATGATGCCATTCATGATGGTGTTGACATTCTGTCACTCTCCTTTGGCCCTTCTCCTCCACAACCCATTTACTTTGAGGATGCAGTCAGTGTTGGTGCATTCCATGCATTCCAAAATGGCATTCTTGTTTCTGCTTCCGCTGGAAACTCCATCTTCCCAGCTACTGCCTGCAATGTTGCTCCTTGGATTCTCACTGTTGCTGCTAGCACCCTCGATAGACAATTCAGATCAGATATCCACCTTGGAAATTCAAAAGTTTTGAAGGGTCTGTCTTTGAATCCAATAAAAATGGACAACTGGCATGCTTTGATATATGCAAGTGCAGCCGCAGCGCCAGGAGTTCCAGCAACAAATGCAAGCTTCTGTAAGAACAATACTCTAGATCGTAGCTTGATAAAGGACAAAATTGTGATCTGTACAATTGAGAAACTCACTGAGAACCGAAGATTGAAGGCTATGGTAATAAAGGAAGGTGGAGGAGTTGGAATGATACTTATTGATCACAATACCAGAGACGTTGGCTTTGAGTTTGTGATCCCAGCCACTCTCATTGGTCAGGATGCTGTAGAGGACCTTCAATCATACATCAACACAGAGAGGAATCCCATTGCTAGAATCTATCCAACAAGAACTGTTCTTGATACCAAACCTGCACCAGAAGTGGCAGCTTTTTCCTCCATGGGGCCCAATGTACCTGACATCACAGCACCCGGGGTAAATATTCTGGCAGCATGGTCTCCGGTAGCAACCGAAGACACGGTGGAACAACGATCCCTGGACTATAACATCATTTCAGGAACATCAATGTCGTGCCCACACATTTCTGCCATTGCTGCAATTATAAAGTCTCACTATCCCTTCTGGAGTCCTGCATCCATAATGTCTGCAATTATGACAACATCAACTGTCATGGACAACACTGGTCGTGTCATTGGAAGAGATCCCAATGATACTAAAACAACACCTTTTGACTATGGATCTGGCCATGTTAACCCACTTGCATCACTGAATCCAGGACTAGTATATGATTTTAATACTCAAGATGTTGTCAAGTTTCTATGTAGCAATGGAGCATCAGCAGCACAACTGAAGAACCTCACTAGTGGAGGAGAATGTCAGAAATATCCTAATCCTACAGCTTCATACAACTTCAACTACCCTTCCATTGGTGTGTCCAAATTGAACGGCAGTTTATCGGTGTATCGGACGGTTACCTTCTACGGCAAGGAAGCAACAGTGTACTATGCAAGCATTGAAAATCCAGAAGGTGTGAATGTTACAGTTACACCATCTGAACTGAGGTTTGTGAAGGAAGGGGAGAAGGCAAGTTTCAGGGTTGATTTGAAGGCATTGAAGAAGAGCAATGGCAACTTTGTATTTGGTGGCATCACATGGAAGAATGGCATACAGAGGGTTAGGACTCCCATTGGTCTCAATGTAATCTCCACTTCCTATTAA 2118 0.4481 MDPPPSSLGEAKAEALHHYSKSFRGFSAMLTPEQANQLQEHESVVSVFESKLNRLHTTHSWDFLGLNSAYTGSHVALDWASDVIVGVVDSGVWPESESFRDYGLGPVPERFKGECVTGDNFTLANCNKKIIGARFYSKGFEADVGPLEDVVNRQYFRSPRDSDGHGSHTASTIAGSIVANASLLGIGRGTARGGAANARLAIYKACWFGYCSDADILSAMDDAIHDGVDILSLSFGPSPPQPIYFEDAVSVGAFHAFQNGILVSASAGNSIFPATACNVAPWILTVAASTLDRQFRSDIHLGNSKVLKGLSLNPIKMDNWHALIYASAAAAPGVPATNASFCKNNTLDRSLIKDKIVICTIEKLTENRRLKAMVIKEGGGVGMILIDHNTRDVGFEFVIPATLIGQDAVEDLQSYINTERNPIARIYPTRTVLDTKPAPEVAAFSSMGPNVPDITAPGVNILAAWSPVATEDTVEQRSLDYNIISGTSMSCPHISAIAAIIKSHYPFWSPASIMSAIMTTSTVMDNTGRVIGRDPNDTKTTPFDYGSGHVNPLASLNPGLVYDFNTQDVVKFLCSNGASAAQLKNLTSGGECQKYPNPTASYNFNYPSIGVSKLNGSLSVYRTVTFYGKEATVYYASIENPEGVNVTVTPSELRFVKEGEKASFRVDLKALKKSNGNFVFGGITWKNGIQRVRTPIGLNVISTSY* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0168 705 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 697 IPR045051 -
Amo13g0168 705 Pfam Peptidase inhibitor I9 9 55 IPR010259 -
Amo13g0168 705 Gene3D - 292 433 - -
Amo13g0168 705 SUPERFAMILY Subtilisin-like 55 560 IPR036852 GO:0004252|GO:0006508
Amo13g0168 705 Pfam Fibronectin type-III domain 603 696 IPR041469 -
Amo13g0168 705 Gene3D - 573 701 - -
Amo13g0168 705 PANTHER CUCUMISIN-LIKE 7 697 - -
Amo13g0168 705 CDD Peptidases_S8_3 55 522 IPR034197 -
Amo13g0168 705 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 56 IPR037045 -
Amo13g0168 705 PRINTS Subtilisin serine protease family (S8) signature 485 501 IPR015500 -
Amo13g0168 705 PRINTS Subtilisin serine protease family (S8) signature 80 99 IPR015500 -
Amo13g0168 705 PRINTS Subtilisin serine protease family (S8) signature 161 174 IPR015500 -
Amo13g0168 705 Gene3D Peptidase S8/S53 domain 82 568 IPR036852 GO:0004252|GO:0006508
Amo13g0168 705 CDD PA_subtilisin_like 298 426 - -
Amo13g0168 705 Pfam Subtilase family 81 526 IPR000209 GO:0006508|GO:0008236
Amo13g0168 705 ProSiteProfiles Serine proteases, subtilase domain profile. 60 556 - -
Amo13g0168 705 ProSitePatterns Serine proteases, subtilase family, serine active site. 486 496 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0168 Amo-Chr13 2083518 2086954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0168 16 696 Subtilisin-like Serine Gene Family AT2G04160 44.101 4.43e-180 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0168 - - gmx:100792672 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0168 13 2083518 2086954 Amo13g0168 13 2083518 2086954 ECH