Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0147 ATGGCGGAGGAGGCGAAAGCGGTGCCGGAGGCGGAAGAGCTTCCCAGGACTATCGTGCGCCGCATCGTGAAGGATAAGATATCCCGATGCTCCGAAGACGGAGACATATCCGTCAACAAAGACGCACTTCTTGCATTCTCTGAAAGTGCCAGGATCTTTATCCACTACATTTCCGCAACAGCTAATGACATTTGTAAGGAGTCAAAGAGGCAGATAGTCAATGCTGATGATATTTTCAAAGCTCTTGAAGAAACTGACTTCTCTGAGTTTATCCGCCCTCTTAAAGCTTCTCTTGAAGACTTCAGGAAGAAGAATGCTGGGAAGAAAGCAGCAGTGTCAAAAGAAAAGGAAAGTGAGAAGAACAAGAAAAGGAAGGTGGAAGGGGAGCCATCTGGTAAAGTCAAATCTGATAATGGGGAGTCACCCGAGAAAGGGGATAGTGGTGATGCCGAATGA 456 0.4693 MAEEAKAVPEAEELPRTIVRRIVKDKISRCSEDGDISVNKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASLEDFRKKNAGKKAAVSKEKESEKNKKRKVEGEPSGKVKSDNGESPEKGDSGDAE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0147 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 82 IPR003958 -
Amo13g0147 151 MobiDBLite consensus disorder prediction 104 151 - -
Amo13g0147 151 Coils Coil 109 129 - -
Amo13g0147 151 Gene3D Histone, subunit A 3 149 IPR009072 GO:0046982
Amo13g0147 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 144 - -
Amo13g0147 151 SUPERFAMILY Histone-fold 14 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0147 Amo-Chr13 1928164 1930019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0147 14 119 CCAAT-HAP3 Transcription Factor Family AT4G14540 28.302 4.24e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Amo13g0147 CBFD_NFYB_HMF 1.4e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0147 K02326 - gmx:100306382 196.823