Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0120 ATGTCTTCCAACAACAAACAAGCTCTTTTCAAAACTGTATTCACAATAAACGGTAGCTGTGGCTGCGGCAAAACAAAGGCCTTAGAGGTACACGAACCAACCCCAAAACCCAAAATCTCCATTCACCAGAACAACACAAATAACCCTAGCAGCATGGCTTCTTCATTCACCACTACTTCGCACAACGGTGCCTTCTCCGGCGCTGAGGACGAAGATTCCTCCACCACAATCTCTGAATCCGAAACCACCCATGAGCATATCAGCAATAACCTTATTATCCCCAAACGAAGCCCACTCATGGATACACTTGCAGTTGAGAAGGACTCTTCGGACCCATATCATGATTTCCGGCATTCCATGCTCCAAATGATCTTCGAGAAAGAGATTGAATCTAAGGATGATCTTCAGGATCTTCTTCAGTGTTTTCTTCAGCTGAATGCACCTCATTACCATCATATCATCGTTAAGGCCTTCAATCAGATATGTGAAGAGGCCTTCCCTGAGAAGGTTTGTACTACTACCCCTTCTATTGACAGAAGATCTTCCTCTTGTAGGAACACCTTCATGGTTCACAAGACTTGCCGCTGA 588 0.4473 MSSNNKQALFKTVFTINGSCGCGKTKALEVHEPTPKPKISIHQNNTNNPSSMASSFTTTSHNGAFSGAEDEDSSTTISESETTHEHISNNLIIPKRSPLMDTLAVEKDSSDPYHDFRHSMLQMIFEKEIESKDDLQDLLQCFLQLNAPHYHHIIVKAFNQICEEAFPEKVCTTTPSIDRRSSSCRNTFMVHKTCR* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0120 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 104 162 IPR006458 -
Amo13g0120 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Amo13g0120 195 MobiDBLite consensus disorder prediction 35 91 - -
Amo13g0120 195 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Amo13g0120 195 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 172 - -
Amo13g0120 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 172 IPR038933 GO:0045892
Amo13g0120 195 MobiDBLite consensus disorder prediction 38 73 - -
Amo13g0120 195 Pfam Transcriptional repressor, ovate 109 164 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0120 Amo-Chr13 1749036 1749757 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo13g0120 Ovate 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0120 - - gmx:102660065 216.083