Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0080 ATGGATCTAAATCTATTATCATATGTGAGGAGAAAATTACTACCATATAACATAGATGATGCTACGTTTTTTATTATATCTACCTTCATAATCATCATACTAGTACTACTATTTTTTTTTCATAAACTCAAAATTAGAAGAACCAAATTGAAGCTACCACCATGTCCACCAAAACTCCCTTTCATTGGAAATTACCATCAACTAGGAACACTTCCTCACCGCACTTTCCAATCTCTATCAAAAACCTATGGCCCTTTAATTTTACTCTACCTAGGCCACCTTCGAGTTTTGGTAGTTTCGTCGGCCGAATTGGCGAAAGAAGTCATGGAAACAAACGATGTGGTTTTCGCTAGCCGGCCGCACCACACGGCCACGAGGGTCTTGCTATATGGTTGCAAGGACATCGCATTCGAGTCCTACGGCGAAGCATGGAGACAGAAAAGAAAGATTTGTGTTCTTGAGTTGCTTAGCGCGAAAAAGGTTCAATTACTCCAATATATAAAAGAAGAGGAGGTAATGAGTCATCTATTGGATTTAGGGGTTGGGGATCTTTTTCCAATGTTGGGTTGGGTTGATGTTCTAATAAGTGGAAGGGTTAAGAGATATAGGGACACTTTTGAAGTGTTGGATGCTTTCTTTGATCATGTAATTGAGGAGCATAAGATGGCAAGCAAAGAGGATGATCATAATAATAATAAGAAGAAAGATTTTGTGGACACTCTTCTTCAACATCAAAAGGCTATTATGGTTGACTTTGAGCTTGGTGATGATGATGTTAAGGCACTCATAATGGACATGTTTTTGGGAGGGAGTGACACAACTTCATCAACACTAGAATGGGCTTTCACAGAGCTAATGAGAAGCCCAATGAAAATGAAAAAGGCCCAAGATGAGGTAAGAAGAGTTATTGGCAACAAATCAAAATTAGAAGAAAATGATATTAATCAAATGAATTACTTAAAATGTGTCATCAAAGAAACCCTAAGATTACATCCAGCTGCTCCTCTTTTGACTCCAAGAGAAACAACACGTAAAACCAAACTCCAAGGCTATGATATTCCTCAAAAAACAATGGTTTATGTTAATGTATGGGCAATTCAAAGAGATCCTCAAATTTGGCAAGAACCTGATGAGTTTATACCTGAAAGATTTGAAGACAATGAGGTTAATTTCAATGGTAAATGCTTTCAATTTTTACCATTTGGTTCTGGAAGAAGAAAATGCCCTGGAATGACATTTGGAATTACTTCAGTTGAATATGTTCTTGCTAATCTTTTATGTTGGTTTGATTGGAAGATACCAAATCAAAGTGGTGTACCTGGTCATGCCCTAGATATGTCTGAGACCTTTGGCCTCACCGTCAACAGAAAAGTTCCACTTTATCTTCAGCCGATAATGCCGAGCACACACAAAAACAACAAAATTACAATGGCACTTATTCTATCAGTTCTAGAGAAATTGCAACATCAACCAAATTCAACCCTCTCTACCATATGTTTCATCATAATCATAAGTATATTGTGTATTCTTAAGTTCACAAGAAGAAACAACAAGATCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTAAAAAATATGGCCCTCTTTTGTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCAGCAGAACTTGTTGAAGAAATAGCAAAATCACATGATGTTGCTTTCTCCAATAGAGCAAACAATAAAGCTGCAAGGGTTTTCTTCTATCAATGCAAGGAGGTTGGTTTTGCACCCTATGGAGAGGAATGGAGAAAAAAGAGGAAGCTAAGCTCTTTCACAAGAAGAAACAACAAGTTCAATAAACTTCCACCATCTCCACCAAAGCTACCAATAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCCTTAAAAGCACTTTCTGACAAATATGGCCCTATTTTGTTGCTTCAATTAGGGCAAACTAAAGCACTAGTTGTGTCTTCAGCAGATATTGTTGAAGAAATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAACACTAAAGCTGCCAAGGTATTATTCTATCAATGCAAGGAGATTGCTTTTGCACCCTATGGAGAGGAATGGAGAAACAAAAGGAAGCTCTGTGTTCTTGAGCTTCTAAACACAAATAGGGTGAAGTCCTTTCATCCCGTTAGAACAAATGAAGTATCAACAATGATTAACTCCATACATGAAGCTTGTGCAAAAGGGTTCGAAACTAGTGATGATGGTCAGAAAAGCATTGCTGAGGTTGTGAGGAAGATGATGTCACAATTTTTAAAATTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAGGTTACTTTTGCTGAATTAGATGAGTTCTTAGAAGAAGTCATTGAAGAGCATAAGAGAAAGAAAAGAGATGATAATAATAAAGACTTTGTTGATATACTTCTTCAACTTCAAGAGAGGGACATGCTTGACTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTCTTGGACCTGTTAGTTGCAGGAAGTGACAGTATTTCATCAACTATTGAATGGGCCTTTGCAGAACTTGCTAACAGTCCAAAGGTCATGAAGAAAGTACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAGGAAAATGATCTAAATCAAATGAACTACATGAAGTGTGTAATTAAAGAAACTCTTAGATTACATCCACCAGGTCCATTTTTAATTCCAAGAGAGACAGCAAATAGTGTGGAAATAAAAGGGTATCACATTCCCAAAAAAGTAACAGTATATATAAATTCATATGCAATTCATAGAGATCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGCAACCAACAAATTGATTACAAGGTGATAGATTCTCAATTTATTCCATTTGGTATTGGGAGAAGGGGTTGTCCTGGAATGTCATTTGGAGTTGCTTCTCTTGAGTATGTGATTGCTAATCTTCTTTATTGGTTTGATTGGAATGTTCCTAATAATAATAATAGTGCATTGATAGATATGAGTGAGATAAGTGGGTTCACAAGAAGAAACAACAAGTTCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTCACAAATATGGCCCTCTTTTGTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCATCAGATCTTGTTGAAGAGATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAATACTAAAGCTTCAAAGGTATTCTTCTATCAATGCAAGGAGATTGGTTTTGCACCCTATGGAGAGGAATGGAGAAGGAAAAGGAAGTTGTGTGTTCTTGAGCTTCTAAGCACAAATAGGGTAAAGTCGTTTCAACCCATTAGAGAAAATGAAGTATTAATGATGATTAATTCTATACATGAAGCTTGTACAAAAGGATCGTCAGTGAATCTATCTAAGATGATTGCTGCAACATCAATGAACATATCTAGTAGGTGCATTTTCGGACTAAGGTTCGAAACAAGTGATGATGGTAGAAAAAGCATTGTGGAGGTTGTGAGGAAGATGATGACACAATTATCAAAACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCACGTCAAGATTAAAGGTTATTCATGCTGATTTTGATACGTTCTTAGAAGAGATTATTGAAGAACATAAGAGAAAGAAGAGAAATTGTGATGATAATAATAAAGACTTTGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTTGTGGATATGTTTGTTGCGGGAAGTGACACTGTTTCAACAACTATTGAATGGGTCTTTGCAGAACTTGCTAATAATCCAAAGACCATGAAAAAAATACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAGGAAAATGACCTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTGTATATAAATTCATATGCAATTCATAGAGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTACCCAACAAGCTGATTATAAGGGAATAGGTTTTCAATTGATCCCATTTGGAATTGGGAGAAGGGCTTGTCCCGGAGTTTCATTTGCAGTTGCTTCTCTTGAGTATGTGATGGCTAATCTTCTCTATTTATTTGATTGGAAGGTTCCTAATAATAATGGTGCATTGATAGATATGAGTGAGTTGAGTGGGTTAACCATTAGCAAAAAACATCCACTTTATTTAGAGCCAATGCCTTACTTAATTTGTTGA 4614 0.3691 MDLNLLSYVRRKLLPYNIDDATFFIISTFIIIILVLLFFFHKLKIRRTKLKLPPCPPKLPFIGNYHQLGTLPHRTFQSLSKTYGPLILLYLGHLRVLVVSSAELAKEVMETNDVVFASRPHHTATRVLLYGCKDIAFESYGEAWRQKRKICVLELLSAKKVQLLQYIKEEEVMSHLLDLGVGDLFPMLGWVDVLISGRVKRYRDTFEVLDAFFDHVIEEHKMASKEDDHNNNKKKDFVDTLLQHQKAIMVDFELGDDDVKALIMDMFLGGSDTTSSTLEWAFTELMRSPMKMKKAQDEVRRVIGNKSKLEENDINQMNYLKCVIKETLRLHPAAPLLTPRETTRKTKLQGYDIPQKTMVYVNVWAIQRDPQIWQEPDEFIPERFEDNEVNFNGKCFQFLPFGSGRRKCPGMTFGITSVEYVLANLLCWFDWKIPNQSGVPGHALDMSETFGLTVNRKVPLYLQPIMPSTHKNNKITMALILSVLEKLQHQPNSTLSTICFIIIISILCILKFTRRNNKINNLPPSPPKLPLIGNLHQLGTLPHQSLKALSKKYGPLLLLQLGQTQALVVSSAELVEEIAKSHDVAFSNRANNKAARVFFYQCKEVGFAPYGEEWRKKRKLSSFTRRNNKFNKLPPSPPKLPIIGNLHQLGTLPHQSLKALSDKYGPILLLQLGQTKALVVSSADIVEEIVKTHDVAFSNRANTKAAKVLFYQCKEIAFAPYGEEWRNKRKLCVLELLNTNRVKSFHPVRTNEVSTMINSIHEACAKGFETSDDGQKSIAEVVRKMMSQFLKFGVGDLFPSLDWVDVLTGFMSRLKVTFAELDEFLEEVIEEHKRKKRDDNNKDFVDILLQLQERDMLDFELNGDTMKALLLDLLVAGSDSISSTIEWAFAELANSPKVMKKVQEEVRRIVGGKSMIEENDLNQMNYMKCVIKETLRLHPPGPFLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQIDYKVIDSQFIPFGIGRRGCPGMSFGVASLEYVIANLLYWFDWNVPNNNNSALIDMSEISGFTRRNNKFNNLPPSPPKLPLIGNLHQLGTLPHQSLKALSHKYGPLLLLQLGQTQALVVSSSDLVEEIVKTHDVAFSNRANTKASKVFFYQCKEIGFAPYGEEWRRKRKLCVLELLSTNRVKSFQPIRENEVLMMINSIHEACTKGSSVNLSKMIAATSMNISSRCIFGLRFETSDDGRKSIVEVVRKMMTQLSKLGVGDLFPSLDWVDVLTGFTSRLKVIHADFDTFLEEIIEEHKRKKRNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKALLVDMFVAGSDTVSTTIEWVFAELANNPKTMKKIQEEVRRIVGGKSMIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGTQQADYKGIGFQLIPFGIGRRACPGVSFAVASLEYVMANLLYLFDWKVPNNNGALIDMSELSGLTISKKHPLYLEPMPYLIC* 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0080 1537 SUPERFAMILY Cytochrome P450 1069 1531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Coils Coil 1285 1305 - -
Amo13g0080 1537 Gene3D Cytochrome P450 629 1062 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 772 1059 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 27 174 - -
Amo13g0080 1537 SUPERFAMILY Cytochrome P450 53 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Coils Coil 292 312 - -
Amo13g0080 1537 Gene3D Cytochrome P450 508 628 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Gene3D Cytochrome P450 1063 1530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 496 622 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 496 622 - -
Amo13g0080 1537 Pfam Cytochrome P450 183 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Pfam Cytochrome P450 1069 1518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Pfam Cytochrome P450 769 1063 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Pfam Cytochrome P450 523 628 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Pfam Cytochrome P450 634 785 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 Pfam Cytochrome P450 53 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1471 1480 IPR017972 GO:0005506|GO:0016705
Amo13g0080 1537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1009 1018 IPR017972 GO:0005506|GO:0016705
Amo13g0080 1537 SUPERFAMILY Cytochrome P450 634 1061 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS P450 superfamily signature 1391 1402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS P450 superfamily signature 1469 1478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS P450 superfamily signature 1478 1489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS P450 superfamily signature 1338 1355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1327 1344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1468 1478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1390 1408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1431 1455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1478 1501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1096 1115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1214 1232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1347 1373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PRINTS E-class P450 group I signature 1120 1141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 1063 1533 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 173 466 - -
Amo13g0080 1537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Amo13g0080 1537 SUPERFAMILY Cytochrome P450 520 629 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1063 1533 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 27 174 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 772 1059 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 627 764 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 173 466 - -
Amo13g0080 1537 PANTHER CYTOCHROME P450 71B11-RELATED 627 764 - -
Amo13g0080 1537 Gene3D Cytochrome P450 42 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0080 Amo-Chr13 1070053 1109509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0080 501 630 Cytochrome P450 AT3G48280 46.923 1.40e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0080 K20617 - fve:101308399 700.279