Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0068 AAAAATCTTCCTCCAAGTCCACCAAAACTTCCCATAATTGGAAACCTCCACCAACTAGGCAAAAACCCCCACATTTCTCTTCAAACACTTTCACAAAAATATGGGCCAATAATTCACCTTCAACTAGGTGAAGTCCCAACAGTGGTTGTTTCATCATCTAAGGTTGCAAAAGAAGTGCTTAGAACACATGATCTTGCACTTGCAAGCCGTCCACAACTATATTCAGCTAAGTACCTTTTCTACAATTGCACTAATGTTGTGTTCTCTCCCTATGGTGCTTATTGGAGGCATATTAGAAAGATTTGCATACTTGAGATTCTAAGTTCCAAAAGGGTACAATCATATAGTTCTGCTAGGGAACAAGAAGTTGCTCGTTTAGTTCAAAGGGTTGCAGAGACTTATCCAAGAGCTTGTAATCTTTCTAGGATGCTTGGACTGTACGCAAACGATATTCTCTGTCGCGTCGCATTTGGAAGAGATTTTTCGGTAGAAGGAGAGTACCAAAGACATGGATTCCAGAAGATGCTTGATGAGTACCAAGAACTACTTGGAGGGTTCAGTGTTGGTGACTTCTTTCCTTCATTGGAGTTCATACATGGCTTAACAGGTGCGAAATCGAGGCTTAAAGAAACTTCTAGAAGATTTGATCAGCTCTTTGATCAGATATTGGATGAACATAAAGGATGTAATAATAATAAGGTGGATGAAGAAAAGGACCTTGTTGATGTTTTGCTTGAAGTTCAGAAGAATGGCTCACATGAAATGCCTCTCACCACTGATAATATCAAAGCAATTATTTTGGACATGTTTGCTGCAGGAACTGATACAACATTCATTACCCTTGATTGGGGAATGACAGAACTTGTAATGAACCCACAAATTATGAAAAGGGCACAAAAAGAAATAAGAGACATCATGGGAGAAAGAAAAGTTATCCTAGAGAGTGATCTTCACCAATTTCACTACATGAAAGCCATAATCAAAGAAGTGTTCCGGCTACACCCTCCGGTGCCGGTTTTAGTCCCGAGAGAATCCATGGAAGACATAGTCCTAGAAGGATTCGAGATCCCGGCAAGAACAAGATTCTTTGTCAATGCTTGGGCTATAGGAAGGGATCCTGAGAGTTGGGAAGATCCTAATGAGTTTAAACCAGAGAGGTTCTTAGGGAGTGATGTTGATTATAAAGGGAATGATTTTGAGTTGATTCCATTTGGAGCAGGGAGACGAGGGTGTCCGGCGATTGCGTTCGCGGCCGCAGTTATTGAACTTGGTCTGGCTCGGCTGCTACATAGTTTTGATTGGGAGCTTCCTCATGGTGTTAAAGCTCAAGATTTGGACCTCACGGATGTCTTTGGAATTTCCATGCATAGGAGAGAAAATCTTCATGTTGTTGCTAAGCCATATTTTCCATAA 1413 0.4105 KNLPPSPPKLPIIGNLHQLGKNPHISLQTLSQKYGPIIHLQLGEVPTVVVSSSKVAKEVLRTHDLALASRPQLYSAKYLFYNCTNVVFSPYGAYWRHIRKICILEILSSKRVQSYSSAREQEVARLVQRVAETYPRACNLSRMLGLYANDILCRVAFGRDFSVEGEYQRHGFQKMLDEYQELLGGFSVGDFFPSLEFIHGLTGAKSRLKETSRRFDQLFDQILDEHKGCNNNKVDEEKDLVDVLLEVQKNGSHEMPLTTDNIKAIILDMFAAGTDTTFITLDWGMTELVMNPQIMKRAQKEIRDIMGERKVILESDLHQFHYMKAIIKEVFRLHPPVPVLVPRESMEDIVLEGFEIPARTRFFVNAWAIGRDPESWEDPNEFKPERFLGSDVDYKGNDFELIPFGAGRRGCPAIAFAAAVIELGLARLLHSFDWELPHGVKAQDLDLTDVFGISMHRRENLHVVAKPYFP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0068 470 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 468 - -
Amo13g0068 470 SUPERFAMILY Cytochrome P450 4 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Amo13g0068 470 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 468 - -
Amo13g0068 470 PRINTS E-class P450 group I signature 55 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 31 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 Pfam Cytochrome P450 4 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0068 470 Gene3D Cytochrome P450 1 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0068 Amo-Chr13 1008153 1010340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0068 5 464 Cytochrome P450 AT3G26310 44.635 4.01e-146 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0068 - - qsu:112001163 724.931