Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0054 ATGAGAAGCCCAATGAAAATGAAAAAGGCCCAAGATGAGGTAAGAAGAGTTATTGGCAACAAATCAAAATTAGAAGAAAATGATATTAATCAAATGAATTACTTAAAATGTGTCATCAAAGAAACCCTAAGATTACATCCAGCTGCTCCTCTTTTGACTCCAAGAGAAACAACACGTAAAACCAAACTCCAAGGCTATGATATTCCTCAAAAAACAATGGTTTATGTTAATGTATGGGCAATTCAAAGAGATCCTCAAATTTGGCAAGAACCTGATGAGTTTATACCTGAAAGATTTGAAGACAATGAGGTTAATTTCAATGGTAAATGCTTTCAATTTTTACCATTTGGTTCTGGAAGAAGAAAATGCCCTGGAATGACATTTGGAATTACTTCAGTTGAATATGTTCTTGCTAATCTTTTATGTTGGTTTGATTGGAAGATACCAAATCAAAGTGGTGTACCTGGTCATGCCCTAGATATGTCTGAGACCTTTGGCCTCACCGTCAACAGAAAAGTTCCACTTTATCTTCAGCCGATAATGCCGAGCACACACAAAAACAACAAAATTACAATGGCACTTATTCTATCAGTTCTAGAGAAATTGCAACATCAACCAAATTCAACCCTCTCTACCATATGTTTCATCATAATCATAAGTATATTGTGTATTCTTAAGTTCACAAGAAGAAACAACAAGATCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTAAAAAATATGGCCCTCTTTTAGCAAACAATAAAGCTGCAAGGGTTTTCTTCTATCAATGCAAGGAGGTTGGTTTTGCACCCTATGGAGAGGAATGGAGAAAAAAGAGGAAGCTAAGCTCTGTAAAGTCCTTTCAACCCATTAGAGAAAATGAAATATCAATGATGATTAACTCCATACATGAAGCTTGTACAAAAGGGTTGTCAGTGAATCTATCTAAGATGATTGTTGCAACATCAACAAACATATCTAGTAGGTGCATTTTCGGGCTAAGGTTCGAAACAAGTGATGATGGTAGAAAAAGCATTGCTAAGGTTGTGAGGAAGATGATGTCACAATTCTTAAAACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAAGTTACTTTTGCTGAATTAGATGCATTTTTAGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAGAAAAATTGTGATGATAATAATAAAGATTTTGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAATTTGAGCTCAATGGAGATACCATGAAATCACTCCTCTTGGATTTGTTTGTTGGGGGAAGTGACACTGTTTCAACAACTATTGAATGGGCCTTTGCAGAGCTTGCTAATCATCCAAAGATCATGAAAAAAGTACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCAAGATAGAAGAAAATGACCTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTATATATAAATTCATATGCAATTCATAGAGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTAACCAACAAGTTGATTATAAGGTAAAAGATTTTCAATTGATCCCATTTGGTTTTGGGAGGAGGGGTTGTCCTGGAATTTCATTTGGGATTGCTTCAGTTGAGTATATGATGGCTAATCTTCTCTATTGGTTTGATTGGAAGGTTCCTAATAATAATAATAATAATAATAATAATAATAATAATAATGGTGCATTGATAGATATGAGTGAGTTTAATGGGTTGACCGTTACCAAGAAACAACCACTTTATTTGGAGCCAATGCCTTACTTAATTTGTTAA 2031 0.3506 MRSPMKMKKAQDEVRRVIGNKSKLEENDINQMNYLKCVIKETLRLHPAAPLLTPRETTRKTKLQGYDIPQKTMVYVNVWAIQRDPQIWQEPDEFIPERFEDNEVNFNGKCFQFLPFGSGRRKCPGMTFGITSVEYVLANLLCWFDWKIPNQSGVPGHALDMSETFGLTVNRKVPLYLQPIMPSTHKNNKITMALILSVLEKLQHQPNSTLSTICFIIIISILCILKFTRRNNKINNLPPSPPKLPLIGNLHQLGTLPHQSLKALSKKYGPLLANNKAARVFFYQCKEVGFAPYGEEWRKKRKLSSVKSFQPIRENEISMMINSIHEACTKGLSVNLSKMIVATSTNISSRCIFGLRFETSDDGRKSIAKVVRKMMSQFLKLGVGDLFPSLDWVDVLTGFMSRLKVTFAELDAFLEEVIEEHKRKKKNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKSLLLDLFVGGSDTVSTTIEWAFAELANHPKIMKKVQEEVRRIVGGKSKIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQVDYKVKDFQLIPFGFGRRGCPGISFGIASVEYMMANLLYWFDWKVPNNNNNNNNNNNNNGALIDMSEFNGLTVTKKQPLYLEPMPYLIC* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0054 676 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 211 272 - -
Amo13g0054 676 SUPERFAMILY Cytochrome P450 238 670 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 Pfam Cytochrome P450 1 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 Pfam Cytochrome P450 290 647 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PANTHER CYTOCHROME P450 71B11-RELATED 211 272 - -
Amo13g0054 676 Coils Coil 414 434 - -
Amo13g0054 676 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 116 125 IPR017972 GO:0005506|GO:0016705
Amo13g0054 676 SUPERFAMILY Cytochrome P450 2 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 Gene3D Cytochrome P450 1 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PANTHER CYTOCHROME P450 71B11-RELATED 274 672 - -
Amo13g0054 676 PANTHER CYTOCHROME P450 71B11-RELATED 1 181 - -
Amo13g0054 676 PRINTS P450 superfamily signature 520 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS P450 superfamily signature 598 607 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS P450 superfamily signature 467 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 Gene3D Cytochrome P450 223 666 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 Coils Coil 7 27 - -
Amo13g0054 676 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 600 609 IPR017972 GO:0005506|GO:0016705
Amo13g0054 676 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 274 672 - -
Amo13g0054 676 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 181 - -
Amo13g0054 676 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 476 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 560 584 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 456 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 519 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 607 630 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0054 676 PRINTS E-class P450 group I signature 597 607 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0054 Amo-Chr13 876460 883301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0054 210 674 Cytochrome P450 AT3G26300 37.182 1.44e-111 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0054 K20617 - aip:107632412 647.506