Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0053 ATGCAAAGATTCTCAACAATAATAGATTTGTTAGTTGCAGGAGGTGACACTGTTTCATCAATTATTGAATGGGCCTTTGCAGAACTTGCTAATAATCCAAAGGTCATGAAGAAAGTACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAGGAAAATGATATAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAGCTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGTAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTATATATAAATTTATATGCGATTCATAGGGATCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTAACCAACAAGTTGATTATAAGGTAAAAGATTTTCAGTTGATCCCATTTGGAATTGGGAGGAGGGGTTGTCCTGGAATTTCATTTGGGGTTGCTTCAGTTGAGTATATGATGGCTAATCTTCTCTATTGGTTTGATTGGAAGGTTCCTAATAATAATAATAATGGTGCATTGATAGATATGAGTGAGATGAGTGGGTTGAACGTTACCAAAAAACAACCACTTTATTTGAAGCCAACACCTTATTTAATTTGTTAA 645 0.3457 MQRFSTIIDLLVAGGDTVSSIIEWAFAELANNPKVMKKVQEEVRRIVGGKSMIEENDINQMKYMKCVIKEALRLHPPGPLLIPRETVNSVEIKGYHIPKKVTVYINLYAIHRDPKLWDNAEEFIPERFEGNQQVDYKVKDFQLIPFGIGRRGCPGISFGVASVEYMMANLLYWFDWKVPNNNNNGALIDMSEMSGLNVTKKQPLYLKPTPYLIC* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0053 214 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 210 - -
Amo13g0053 214 PANTHER CYTOCHROME P450 71B11-RELATED 7 210 - -
Amo13g0053 214 SUPERFAMILY Cytochrome P450 5 210 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 146 155 IPR017972 GO:0005506|GO:0016705
Amo13g0053 214 Pfam Cytochrome P450 6 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 65 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 106 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 143 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS E-class P450 group I signature 153 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS P450 superfamily signature 66 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0053 214 PRINTS P450 superfamily signature 144 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0053 Amo-Chr13 874854 875634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0053 5 212 Cytochrome P450 AT3G26330 49.289 2.18e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0053 K20617 - ahf:112736131 441.81