Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0052 TTAATTGGAAACCTTCACCAACTAGGAACACTTCCACACCAATCCTTAAAGGCACTTTCTGACAAATATGGCCCTCTTTTGTTGCTTCAGTTAGGGCAAACTCAAGCACTAGTTGTCTCTTCAGCAGATATTGTTGAAGAAATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAACACTAAAGCTGCCAAGGTATTCTTCTATCAATGCAAGGATATTGGTTTTGCACCCTATGGAGAGGAATGGAGAAAGAAAAGGAAGCTCTGTGTTCTTGAGCTTCTAAGCACAAACAGGGTAAAGTCTTTTCTTTCTGTTAGAGCAAATGAAGTATCAATGATGATTAACTCCATACATGAAGCTTGTGCAAAAGAGTCGTCAGTGAATCTATCCAAGCTGATTATTGTAACCTCAAGCAACATATCTTATAGGTGCATTTTCGGGCTAAGGTTCGAAACTAGTGATGATGGTAGGAAAAGCATTGCTGAGGTTGTGAAGAAGTTGATGATACAATTTTCAAAACTTGGGGTTGGAGATTTGTTTCCTTCGTTAGATTGGGTTGATGTTCTTACAGGTTTTATGTCAAGATTAAAGGTTATTTTTGCTGAATTAGATGCATTCTTAGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAAAGAGATGACAATAATAAAGACTTTGTTGATATACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTCTTGGATTTGTTAGTGGGAGGAAGTGACAGTGTTTCAACAACTATTGAATGGGCCTTTGCAGAACTTGCTAACAATCCAAAGGTAATGAAGAAAGTTCAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAAGAAAATGACTTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCGGGTCCACTTTTAATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTATTACATTCCCAAAAAAGTAACAGTATATATAAATTCATATGCAATTCATAGAGATCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTAACCAACAAATTGATTACAAGGGGATAGATTCTCAATTTATTCCATTTGGTATTGGGAGAAGGGGTTGTCCTGGAATTTCATTTGGAGTTGCTTCTCTTGAGTATGTGATTGCTAATCTTCTTTATTGGTTTGATTGGAATGTTCCTAATAATAATAGTGCATTGATAGATATGAGTGAGATAAGTGGGTTGAACATTAGCAAGAAACAACCACTTTATTTGAAGCCAACACCTTACTTAATTTGTTAA 1380 0.3601 LIGNLHQLGTLPHQSLKALSDKYGPLLLLQLGQTQALVVSSADIVEEIVKTHDVAFSNRANTKAAKVFFYQCKDIGFAPYGEEWRKKRKLCVLELLSTNRVKSFLSVRANEVSMMINSIHEACAKESSVNLSKLIIVTSSNISYRCIFGLRFETSDDGRKSIAEVVKKLMIQFSKLGVGDLFPSLDWVDVLTGFMSRLKVIFAELDAFLEEVIEEHKRKKRDDNNKDFVDILLQLQERDMLEFELNGDTMKALLLDLLVGGSDSVSTTIEWAFAELANNPKVMKKVQEEVRRIVGGKSMIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYYIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQIDYKGIDSQFIPFGIGRRGCPGISFGVASLEYVIANLLYWFDWNVPNNNSALIDMSEISGLNISKKQPLYLKPTPYLIC* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0052 459 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
Amo13g0052 459 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS P450 superfamily signature 391 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 390 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 20 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 400 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 44 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 138 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PANTHER CYTOCHROME P450 71B11-RELATED 1 455 - -
Amo13g0052 459 Pfam Cytochrome P450 1 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 SUPERFAMILY Cytochrome P450 1 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0052 459 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0052 Amo-Chr13 855016 859099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0052 1 453 Cytochrome P450 AT1G13110 42.299 6.29e-127 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0052 K20617 - aip:107632412 593.964