Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0048 ATGACATTGCTTTTCTCCAATAGAGCAAACACTAAAGCTGCAAAGATTTTCTTCTATCAATGCAAGGAGGTTGGTTTTGCACCCTATGGAGAAGAGTGGAGAATGAAAAGGAAGCTATGTGTTCTTGAGCTTCTAAGCACAAATAGGGTAAGGTCATTTCAGCCAATTAGAAAAGATGAAGTATCAATGATGATTAACACCATATGTGAAGCTTGTGCAAAAGGATCTATTGTGAATCTATCTAAGATGATTATTACAACTGCAAACAACATATCTTCAAGGTGCATTTTTGGAAGAAGTTRTGATGGTAGAAAAGGCATTGGAGAAGTAGTGAGAAAGATGATGTCACAATTAACAACACTTGGGATTGGAGATTTGTTTCCTTCATTGYATTGGGTTGATGTTCTTACCGGTTTCAACTCAAGATTYAAGGTTACTTTTGKTGAATTAGATGCGTTTRTGGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAAAAGGACAAYAATATTATTAATGATKGTTCTTATGATAATAAAGACTTTYTTGATATATTTCTTCAACTTCAAGAAAAAAACATGCTTGAATTTGAGCTCACCGGAGATACCATCAGAGGAATCCTTATGGACATGTTTGTGGGAGGGAGTGACACAGTTTCAACAACTCTTGAATGGGCTTTTGCCGAACTTGCCAAGAACCCAAAATGCATGAAGAAAGCCCAAGAAGAGGTGAGAAGAATAATTGTGGATGGAAAATCCAAGATAGAAGAAAATCATCTAAACCAAATGAATTACATGAAATGTGTAATCAAAGAAACCCTAAGATTACATCCACCAGTTCCACTTTTAGTCCCTAGAGAAACATCAACAAGTGTGAAACTCAAAGGCTACAACATTCCCAACAAAACAACCGTGTATGTGAATTCATATGCAATTCATAGGGACCCTAAGTTATGGGAAAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTAATAATCATGATCAACAAGTTGATTATAAGGTAATAGATTTTCAATTAATCCCATTTGGTATTGGAAGAAGGGGTTGTCCTGGAGTTTCATTTGGGATTGCATCAGCTGAATATTTGATGGCTAATCTTTTATATTGGTTTGATTGGAAGGTTCCTAATAATAATAGTAATGGTGATGATGATGATTTAGAAATGGACATGAGTGAGTTGAGTGGAATGACAGTCACCAAGAAAGAACCACTTTATCTTGAGCCAATACTTCACTCATTTCATTCTAAATCTTGA 1278 0.3513 MTLLFSNRANTKAAKIFFYQCKEVGFAPYGEEWRMKRKLCVLELLSTNRVRSFQPIRKDEVSMMINTICEACAKGSIVNLSKMIITTANNISSRCIFGRSXDGRKGIGEVVRKMMSQLTTLGIGDLFPSLXWVDVLTGFNSRFKVTFXELDAFXEEVIEEHKRKKKDNNIINDXSYDNKDFXDIFLQLQEKNMLEFELTGDTIRGILMDMFVGGSDTVSTTLEWAFAELAKNPKCMKKAQEEVRRIIVDGKSKIEENHLNQMNYMKCVIKETLRLHPPVPLLVPRETSTSVKLKGYNIPNKTTVYVNSYAIHRDPKLWENAEEFIPERFEGNNHDQQVDYKVIDFQLIPFGIGRRGCPGVSFGIASAEYLMANLLYWFDWKVPNNNSNGDDDDLEMDMSELSGMTVTKKEPLYLEPILHSFHSKS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0048 425 Gene3D Cytochrome P450 2 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 222 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 307 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 87 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 266 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS E-class P450 group I signature 202 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 Pfam Cytochrome P450 6 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PANTHER CYTOCHROME P450 71B11-RELATED 4 418 - -
Amo13g0048 425 PRINTS P450 superfamily signature 267 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS P450 superfamily signature 348 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PRINTS P450 superfamily signature 213 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 418 - -
Amo13g0048 425 SUPERFAMILY Cytochrome P450 4 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0048 425 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0048 Amo-Chr13 806597 811006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0048 7 419 Cytochrome P450 AT1G13110 40.047 3.09e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0048 K20617 - aip:107632412 515.383