Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0047 ATGAATTTTCTACTAAAACAATCGGCTTATTATTATGAGCCAAATCCAACTCTTTACTTAACAATTTTAGGGTTCATAAGCATCTTTCTATTGCTTAAGCTCACAAGAAGAAATTACAAGCCAAATAATAATAAAAATCTTCCACCATCACCACCAAAGCTACCTTTCATTGGAAACCTTCATCAATTTGGAACACTGCCACACCGATCCTTCCATGAACTCTCAAAGAAGCATGGCCCTCTCATGTTCCTTCAATTGGGACAAACACCAGCCATTGTGGTTTCTTCGGTCGAGGTGGCCGAAGAAATCATCAAGAAACATGATGTTGCTTTCTCCAACAAGCCCCAAACAACATCTGGAAAAATCATTCTCTATGGATGCTCTGACGTTGTTTTCGCACCCTATGGTGAAGAGTGGAGACAGAAAAAAAAGATTTGTGTTCTCGAACTTTTAAGCCTCAAAAGAGTGAAGTCTTTCAAATACATTCGTGAAGAAGAGGTTATGGAATTGGTTGATATCATACGTGCAAGGAAAGGATTTTCTATAAATATTAGTGAGTTGATAATTGCAACATCAAACAACATAGTGTCAAGATGTGTTCTTGGACAAAAGTATGATAATCCAGATGGTAATAGCAGCTTTGGAGAGCTTGGAAGGAAGATGATGAGAGAATTGGCTGCTTTTAGTGTGGGAGATTTCTTCCCTTTATTGGGTTGGCTTGATTTTCTCACTGGCCAAATACAAGAATTCAAGGCCACTTTTCATGCATTAGATGCTTTCTTTGATAAGGTGATTGAAGAACATAAGAGGAAAATGATGAAGAAAGAGGATGTTAAAAAGGGTCAATTAGACAAGATGGATTTTGTTGATATACTACTCCAAGTTCAAAAAGATGGTGTGCATGACTTTCAACTCACCAATGATAATCTCAAAGCAATCTTAGTGGACATGTTTGCTGGAGCGAGTGACACTACTTCAACACTTTTGGAATGGACATTAGCAGAACTGATTAAGAATCCAAACACCATGAAGAAAGTTCAAGAAGAAGTAAGAAAAGTTGTTGGGTGCAAATCAAAAATAGATGAAATTGATGTTAATCAAATGGAGTACCTAAAATGTGTAATAAAAGAGACTTTAAGGTTGCATCCACCAGCTCCTTTCATAACACCTAGAGAAACCCTAAGTGATGTGAGGCTAAAAGGGTTTGATATTCCATCAAAAACAAGAGTATTTATAAATGCATGGGCAATTCAAAGGGACCCAAAAATTTGGAAGAACCCTGAAGAGTTCATTCCTGAAAGATTTGAGGAAAACCAAGTTGATTTTCTAAGACAAGATTTTCATTATATCCCCTTTGGTTTTGGAAGAAGAGGATGTGCTGGAATTTCATTTGGACTTGCTTCTACTGAATTCATTCTTGCTAATCTCCTATATTGGTTTAATTGGAAACTACCTAATAATAGTGTAGGTGTGAATATGCAAGATATTGACATGGGTGAGACTTATGGGCTCACTGTAACTAAGAAAGTGCCACTATATCTTGAACCTACATTATATATTATACATTAA 1569 0.3646 MNFLLKQSAYYYEPNPTLYLTILGFISIFLLLKLTRRNYKPNNNKNLPPSPPKLPFIGNLHQFGTLPHRSFHELSKKHGPLMFLQLGQTPAIVVSSVEVAEEIIKKHDVAFSNKPQTTSGKIILYGCSDVVFAPYGEEWRQKKKICVLELLSLKRVKSFKYIREEEVMELVDIIRARKGFSINISELIIATSNNIVSRCVLGQKYDNPDGNSSFGELGRKMMRELAAFSVGDFFPLLGWLDFLTGQIQEFKATFHALDAFFDKVIEEHKRKMMKKEDVKKGQLDKMDFVDILLQVQKDGVHDFQLTNDNLKAILVDMFAGASDTTSTLLEWTLAELIKNPNTMKKVQEEVRKVVGCKSKIDEIDVNQMEYLKCVIKETLRLHPPAPFITPRETLSDVRLKGFDIPSKTRVFINAWAIQRDPKIWKNPEEFIPERFEENQVDFLRQDFHYIPFGFGRRGCAGISFGLASTEFILANLLYWFNWKLPNNSVGVNMQDIDMGETYGLTVTKKVPLYLEPTLYIIH* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0047 522 SUPERFAMILY Cytochrome P450 48 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 Pfam Cytochrome P450 48 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 518 - -
Amo13g0047 522 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Amo13g0047 522 Gene3D Cytochrome P450 40 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0047 522 PANTHER CYTOCHROME P450 71B11-RELATED 16 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0047 Amo-Chr13 800428 803299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0047 18 520 Cytochrome P450 AT3G48280 40.873 2.39e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0047 K20617 - gmx:100792382 622.083