Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0042 ATGTTCCTTCAATTAGGGCAAATTCCAACCTTAGTTATTTCTTCGGCCGACACGGCCAAAGAAATAACCAAAAATCATGATATTATTTTCTCAAGCAGACCTCAGGTAACAGCGGCGAAAATCTTTGTATATAGATGCAAAGATGTGGCGTTTTCGCCCTACAGCGAAGAATGGAGACAGAAAAGAAAAATTTGTGTTCTTGAACTTTTAAGTCTCAAGAGAGTAAAATCGTTTCAATCCATTAGACAAGAAGAGGTAGTCGAATTGGTTAACTCGATTCGCGAATCTTGCGCTACAAGTAAAGTAGGGAGTGTGATCAATCTTAGTGAGATGATGATTGCAGCATCGAACAATATAGTATCAAGATGTGTTCTTGGACAAAAATATGATGCCCCAAAAGATGGAAGAAGCAACAACTTTGGAGATCTTGGAAGGAAATTGATGAAACATTTTGCTGATTTTTGTGTTGGTGATTTTTACCCTAATTTGGGTTGGGTTGATGTTCTTAGAGGGCTTATTCCTGAATTCAAGACCACCTTTGCTGGATTAGAGGCATGTTTTGATGAGTTGATTGAAGAACATAAGAGGATGAAGAAAAATAATGAAGAACCATTATCTATTAAAAAAGATTTTGTTGAGATATTGCTTCAAGTTCAAGAAGATAGTGTTCTTGATTTTCAGCTCACTGGAGAAGCCATCAAAGCAATCCTAGCGGACATGTTTGTTGGAGGAAGTGATACTACTTCAACAACTCTAGAATGGACTTTTGCTGAGCTCCTCAAGAACCCAAATGTCATGAAGAAAGCCCAAGAAGAAGTAAGAAGAGTTGTGGGGAGAAAGTCAAAAGTGGAAGAAAATGATGTGAATCAAATGAACTATTTGCATTGTGTGATCAAAGAAAGTCTTAGATTACATCCACCTCTCCCTCTTTTAGTTCCTCGAGAAACATTATCAGGTGTGGAAGTAAAAGGGTACGATATTCCTCCAAAAACAAGGGTATTTTTTAATGTATGGGGAATTCAAAGGGACCCTGAGTTATGGGAAAATCCTGAAGATTTTCTTCCTGAGAGATTTGAAAATAACCAAGTTGATTTCAAAGGACAAGATTTCCAGTTCCTCCCATTTGGTACTGGAAGAAGGGGATGTCCTGGAATTTCATTTGGACTTACTTCTACTGAATATATTCTTGCTAATCTTCTATATTGGTTTGATTGGAAGCTATGTGATAAGAATGGTCAACTATTACATGACGTAGACATGAGTGAACTTTGTGGGCTCACTGTCACTAAAAAAGTACCACTTCATGTTCAACCCATACCATACTACTCTGTTATTTAG 1338 0.3737 MFLQLGQIPTLVISSADTAKEITKNHDIIFSSRPQVTAAKIFVYRCKDVAFSPYSEEWRQKRKICVLELLSLKRVKSFQSIRQEEVVELVNSIRESCATSKVGSVINLSEMMIAASNNIVSRCVLGQKYDAPKDGRSNNFGDLGRKLMKHFADFCVGDFYPNLGWVDVLRGLIPEFKTTFAGLEACFDELIEEHKRMKKNNEEPLSIKKDFVEILLQVQEDSVLDFQLTGEAIKAILADMFVGGSDTTSTTLEWTFAELLKNPNVMKKAQEEVRRVVGRKSKVEENDVNQMNYLHCVIKESLRLHPPLPLLVPRETLSGVEVKGYDIPPKTRVFFNVWGIQRDPELWENPEDFLPERFENNQVDFKGQDFQFLPFGTGRRGCPGISFGLTSTEYILANLLYWFDWKLCDKNGQLLHDVDMSELCGLTVTKKVPLHVQPIPYYSVI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0042 445 Coils Coil 266 286 - -
Amo13g0042 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Amo13g0042 445 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 440 - -
Amo13g0042 445 Pfam Cytochrome P450 3 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 336 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 115 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PRINTS P450 superfamily signature 243 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 Gene3D Cytochrome P450 1 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0042 445 PANTHER CYTOCHROME P450 71B11-RELATED 1 440 - -
Amo13g0042 445 SUPERFAMILY Cytochrome P450 2 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0042 Amo-Chr13 746660 749833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0042 1 444 Cytochrome P450 AT3G26330 42.282 7.33e-125 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0042 K20617 - gmx:100792382 567.385