Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0031 ATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCTCCGGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTCGATGCGTATAGCTTCGCAATCGTGTTGTGGGAGCTCATACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTCCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGTGCAGAGAATCTTCCTGAGCAATTGGCCGAAATCCTAACTTTGTGCTGGCAAGAGGATCCAAACGCCCGACCAAACTTCACTCAGATAATCCAGATGCTCCTGAATTATTTTTACACCATTGCGCCGCCTGAACCCATGATTCCTTCAAGAATATTCACTTCCGAGAACACTGTCTTGCCACCAGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACAGATGAAACCAGGCTTAATAGTTTTCTTTGCTGCTTCAGCCAGTGTTATTAA 519 0.4624 MMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEQLAEILTLCWQEDPNARPNFTQIIQMLLNYFYTIAPPEPMIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETRLNSFLCCFSQCY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0031 172 Pfam Protein tyrosine and serine/threonine kinase 6 106 IPR001245 GO:0004672|GO:0006468
Amo13g0031 172 MobiDBLite consensus disorder prediction 141 155 - -
Amo13g0031 172 PANTHER SERINE-THREONINE PROTEIN KINASE 3 147 - -
Amo13g0031 172 MobiDBLite consensus disorder prediction 133 156 - -
Amo13g0031 172 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 3 147 - -
Amo13g0031 172 SUPERFAMILY Protein kinase-like (PK-like) 2 135 IPR011009 -
Amo13g0031 172 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0031 172 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0031 Amo-Chr13 653871 654581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0031 1 172 MAP Kinase Kinase Kinase AT5G50180 73.837 4.41e-96 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo13g0031 PK_Tyr_Ser-Thr 9.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0031 - - gmx:100796593 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0031 13 653871 654581 Amo13g0031 13 653871 654581 ECH