Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0030 ATGGAATCTGGTGGAGCTAATAACTTCTACTCAGTTGATGATGAGTTCAGATTGGATACCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCACGGATTGGTGAAGGGGCTCATGCCAAAGTCTATGAGGGAAAATACAAAGACCAGGCTGTTGCTATCAAAATTCTACACAAAGGAGAGACTCCGGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTCGCGATGTTGTCTAGAGTGCAGCATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACTGAGCTCTTGTTGGGAGGAACATTGCGGAAGTATTTGCTTAGCATGCGACCGAAATGCTTGGACAGACATCTTGCCATTGGTTTTGCGCTTGATATTGCGCGTGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGGTAATGTTTTGGTCTGCATTCGGATCAGGAAACTATAA 507 0.4714 MESGGANNFYSVDDEFRLDTKWLIDPKHLYVGPRIGEGAHAKVYEGKYKDQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLSMRPKCLDRHLAIGFALDIARAMECLHSHGIIHRDLKPGNVLVCIRIRKL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0030 168 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 162 - -
Amo13g0030 168 Pfam Protein tyrosine and serine/threonine kinase 32 162 IPR001245 GO:0004672|GO:0006468
Amo13g0030 168 SUPERFAMILY Protein kinase-like (PK-like) 19 161 IPR011009 -
Amo13g0030 168 Gene3D Phosphorylase Kinase; domain 1 17 104 - -
Amo13g0030 168 ProSitePatterns Protein kinases ATP-binding region signature. 35 56 IPR017441 GO:0005524
Amo13g0030 168 PANTHER SERINE-THREONINE PROTEIN KINASE 5 162 - -
Amo13g0030 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Amo13g0030 168 ProSiteProfiles Protein kinase domain profile. 29 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0030 168 SMART serkin_6 29 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0030 168 Gene3D Transferase(Phosphotransferase) domain 1 105 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0030 Amo-Chr13 652433 653398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0030 4 161 MAP Kinase Kinase Kinase AT3G27560 77.848 1.93e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo13g0030 PK_Tyr_Ser-Thr 7.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0030 - - gmx:100796593 283.493