Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0015 ATGAACATAAAAAAGGGTGAGATTGAGAAGGTGAATTGGAAGAATTTGAGTTACAGTGAATTTGTGGAGAGATTCATGCAAAAAAACCAACCTTTGTTGCTCAATGGATTCTCGGAACATCACAATTGGAGAGCTTCAGTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGGGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTTGTTTCGGAGTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATGTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCTTATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTCGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCAATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGCGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGCTATCTGGTTAG 666 0.3979 MNIKKGEIEKVNWKNLSYSEFVERFMQKNQPLLLNGFSEHHNWRASVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSEFIGRCLQDVEGSAVQCSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHANVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRLSG* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0015 221 SUPERFAMILY Clavaminate synthase-like 17 215 - -
Amo13g0015 221 ProSiteProfiles JmjC domain profile. 123 221 IPR003347 -
Amo13g0015 221 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 5 218 - -
Amo13g0015 221 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 5 218 - -
Amo13g0015 221 Gene3D Cupin 2 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0015 Amo-Chr13 230725 233032 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Amo13g0015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0015 - - adu:107472163 468.774