Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3540 ATGTCAAAACCAGGAACCCCGAACCCTAACTCCAGCGCTAACCAAAATGCGCCTCTACCTCTCTCACACTCAGCCACTGTCCAGAGCTCCTCTGAGCTTCTCTCCTCCCTCACTCCCTCACTTCTGTCCAGCCACAACTTGCTACCATCGCCAACACAACCTCTAACTTCGAACAGCCACCGTGGTAACCTTCCAACTTCATCGAGCAGCAACTGTCCCGCCGCGTCAGTTCTGTTCCACCGCGTTCCAGTCCCTTCAGTGGCGTTAGCTCTGTTCCATTGCGCAGCCCTTCCCTCGAAGGTTGGACTGGCATTGGCCTGTGACAATACTATTGTTCTCAAAAATGCTGAGCAGACACCATTGTTTGCTTTGTACGCAGCAAAACTATTTCATGAGGTGGATATATTCTCTGTTAATGGAACCATGCTCATTTGTCGGTTTAGAAGATATAAAGAGGCGTAG 462 0.5022 MSKPGTPNPNSSANQNAPLPLSHSATVQSSSELLSSLTPSLLSSHNLLPSPTQPLTSNSHRGNLPTSSSSNCPAASVLFHRVPVPSVALALFHCAALPSKVGLALACDNTIVLKNAEQTPLFALYAAKLFHEVDIFSVNGTMLICRFRRYKEA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3540 153 MobiDBLite consensus disorder prediction 1 32 - -
Amo12g3540 153 MobiDBLite consensus disorder prediction 47 68 - -
Amo12g3540 153 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 141 IPR016162 GO:0016491
Amo12g3540 153 Pfam Aldehyde dehydrogenase family 95 134 IPR015590 GO:0016491
Amo12g3540 153 SUPERFAMILY ALDH-like 98 134 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3540 Amo-Chr12 124783353 124784151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3540 100 135 Aldehyde Dehydrogenase Gene Family AT3G48000 72.222 4.36e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3540 K00128 - ahf:112730717 271.552