Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3527 ATGACGACGATACCTCAAACAATGGAGGCTCTACGCCAGAGAGCCACGCTCGTCAAGGAATCGCTCCACAAGAGCCAGATCATCACCGACAACATGGTCTCCATCCTCGGCTCCTTCGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATTAAAACACATTCAATTCGAAGCGCACATGATAACATTGACAAGACTCTGAAGGCAGCAGAGGTGTTTTTGGTGCAATTCGAGCAAACTCGCAAGGCGGAGGCTAAAATACTCAGAGGGCCTCAAGAGGATCTGGAAAGCTATTTAGAAGCAGTTGATCAATTGAGAAACAATTTGAAATTCTTCAACAGCAAAAAGAGTTTCAAAGGCAGTGATGGTATCATCAACCATACCAACGGCTTGCTTGCTAAAGCTATCGCAAAGCTGGAAGACGAGTTCAGACTTCTGTTAACAAATTACAGCAAACCGGTGGAACCTGACCGCCTGTTTGACTGCATACCACACCGTCGACGATCGTCAACTTCTGGAAGGCAAAGTGATGCAAGCAAACTCGATCTTGATAAGCAAAGCGAGTCTGAGAAGCAAACAGAACCGGCTGTTTACACACTTCCAACCCTGATACCACCCAGAGTTATTCCTTTGCTACATGACTTAGCACAACAAATGGTCGAAGCTGGCCATCAACAACAGCTCTTTCGACTCTACAGAGACACTCGTGCCCCTGTCTTGGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGTCTAAGATTGGGAACTGGACTCATTTCATGAGGATTGCTGTTAAATTGTTGCTGACTGTGGAAAAGCAAATATGTGATCAAATATTTGATGGTTTTGAAAATATGAGAACTCAATGCTTTTCTGAAGTCACTGCTAGCAGTTTTGTCATGCTTCTTAGTTTCGGAGAGGCTGTTGCCAAAAGCAAGAGGTCATCTGAAAAACTATTTGTTACTCTAGACATGTATGAGACAATGAGAGAACTTCAACCTGAGCTTGAGACAATTTTTGAAGGTAAAGCCTGCACGGAATTGCGCGAAGCTTCTCTGTCCTTGACCAAGAGACTAGGTCAGACAGCCATGGAAACCTTCTGTGACTTTGAGGAACTTATTGAAAATGATGCTACTAAAACTGCTGTGCTTGATGGAACTGTCCATCCACTAACTAGCTATGTGATCAATTATGTTAAGTTTCTCTTTGATTATCAATCAACATTGAAGCAAATTTTTCGCGAGTTTGATCCCAATGACCCAGAAGGTCAGTTAGCAAACCTGACAACAAGGATTATGCAGGCTCTCCAGAATAACCTGGATGGAAAATCAAAACAATATAAAGATCCAGCTTTAACCCAATTGTTCCTTATGAATAATATCCATTACATAGTGAGATCCGTGAGAAGGTCAGATGCAAAGGATATGTTGGGAGAGGACTGGGTGCAAATACATAGAAGAGTTGTGCAACAGCATGCAAATCAGTATAAAAGGATCTCATGGGCAAAGATTGCTCAGTGCCTCACTGTGCAATCATCAGGCGGGGCTGACAGCACCGCTGGAGTTTCAAGAAATATGATTAAAGATAGGTTCAAGAGTTTCAACTCTCAAATTGAGGAGCTTTATTGGAGGCAATCTCAATGGACTGTTCCTGACAGTGAGTTGCGTGAATCTCTCAAACTGGCTATAATCGAAGTACTTTTACCTGCTTATAGATCTTTCCTCAAACGTTTTGGGCCCATGCTTGAGAATGGGAAAAATCCTCAGAAGTACATAAGATACACACCAGAACAAATTGAAGAAATGTTGAATGGCTTTTTCGAGAGCAAGTCGTGGAATGATCAGAAGCGGTGA 1911 0.4322 MTTIPQTMEALRQRATLVKESLHKSQIITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVFLVQFEQTRKAEAKILRGPQEDLESYLEAVDQLRNNLKFFNSKKSFKGSDGIINHTNGLLAKAIAKLEDEFRLLLTNYSKPVEPDRLFDCIPHRRRSSTSGRQSDASKLDLDKQSESEKQTEPAVYTLPTLIPPRVIPLLHDLAQQMVEAGHQQQLFRLYRDTRAPVLEQSLRKLGVERLSKDDVQKMQWEVLESKIGNWTHFMRIAVKLLLTVEKQICDQIFDGFENMRTQCFSEVTASSFVMLLSFGEAVAKSKRSSEKLFVTLDMYETMRELQPELETIFEGKACTELREASLSLTKRLGQTAMETFCDFEELIENDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQIFREFDPNDPEGQLANLTTRIMQALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSDAKDMLGEDWVQIHRRVVQQHANQYKRISWAKIAQCLTVQSSGGADSTAGVSRNMIKDRFKSFNSQIEELYWRQSQWTVPDSELRESLKLAIIEVLLPAYRSFLKRFGPMLENGKNPQKYIRYTPEQIEEMLNGFFESKSWNDQKR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3527 636 Gene3D Exocyst complex component Exo70 75 636 - -
Amo12g3527 636 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 37 632 - -
Amo12g3527 636 SUPERFAMILY Cullin repeat-like 81 627 IPR016159 -
Amo12g3527 636 Coils Coil 99 119 - -
Amo12g3527 636 MobiDBLite consensus disorder prediction 169 195 - -
Amo12g3527 636 Pfam Exo70 exocyst complex subunit 275 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo12g3527 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 37 632 IPR004140 GO:0000145|GO:0006887
Amo12g3527 636 MobiDBLite consensus disorder prediction 169 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3527 Amo-Chr12 124498118 124501781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3527 4 636 EXO70 exocyst subunit family AT5G52340 72.397 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3527 K07195 - gmx:100779774 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3527 12 124498118 124501781 Amo12g3527 12 124498118 124501781 ECH