Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3475 ATGGTGGCTACTTGTATGTCAACAAGTTTTGCACCTTGTAAGACCAGGAATTCAGCAATGGTGCTTAATGTTGTTGGGGGGAGAACATTGACAGAGAATTACCTTGGTAGGGTCTGTTTCATGAAAATGTATAACAAGAAGTATGAATTTTTGGGTGGCATTCGAAACTTGGGTCTAGTTAAAGTTAAGTGTTCAGCAAATTCCCATAGGGTTAGTCCATATCATAGTCAAGACCCTTTTCTAAATTTACATCCGGAGGTGTCAATGTTAAGAGGAGAAGGGAGCAATTTAGGGAGCAACCCGAGAAGGGACGATGGTTCGGGTAGAGATGTATCCGAGACTTTAGGAGTTACTCCTAATCCTAGTAATTACAGTGAAGCAAAGATCAAGGTTATTGGTGTTGGAGGTGGTGGATCAAATGCAGTGAATAGGATGATAGAGAGTAAAATGGGTGGTGTGGAGTTCTGGATTGTTAATACTGATATTCAAGCCATGAGAATGTCACCTGTCTTGCCTGAAAACCGTTTGCAAATCGGTCTGGAGCTTACACGAGGTCTTGGTGCCGGTGGTAACCCTGAGATGGGCATGAATGCTGCAAAAGAAAGCAAAGAATCAATAGAAGAAGCACTTTTTGGAGCTGACATGGTCTTTGTAACAGCCGGAATGGGAGGGGGAACCGGCACAGGTGGAGCTCCAGTTATTGCTAGTATTGCAAAATCAATGGGTATACTGACTGTTGGTATTGTCACCACCCCTTTCTCATTTGAAGGACGAAAGCGAGCCATTCAAGCGCAAGAAGGAGTTACAGCCTTGAGAGACAATGTTGACACTCTGATAGTTATTCCAAATGACAAGCTACTAACAGCGGTTTCTGAATCCACCCCTGTAACTGAAGCATTCAATCTAGCTGATGACATTCTTCGACAAGGTGTTCGTGGCATATCTGATATTATAATGATACCTGGTATGGTAAATGTAGATTTTGCCGATGTTCGAGCAATAATGGCCAATGCAGGTTCTTCACTGATGGGGATAGGAACTGCAACTGGGAAATCCAGGGCAAGGGATGCTGCATTAAATGCCATCCAATCACCTTTGCTAGATATTGGAATAGAGAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAAGTGATCTTACCTTATTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTCGACCCTACGGCGAATTTAATATTTGGAGCAGTTATAGATCCATCACTCAGTGGTCAAGTAAGCATAACACTAATTGCGACCGGATTCAAGCGTCAAGAGGACGGCGAGGGCAGGCCCCCACAGGCTGCTCAACTCGCACAGGGAGATACGACAGTTGGTATCAATCGGCGATCTGCCTCGTTCACCAGTGGAGGTTTTGTTGAGATCCCCGAATTCCTAAAGAAGAAAGGCCAGACACGCTATCCGAGGGCTTAA 1464 0.444 MVATCMSTSFAPCKTRNSAMVLNVVGGRTLTENYLGRVCFMKMYNKKYEFLGGIRNLGLVKVKCSANSHRVSPYHSQDPFLNLHPEVSMLRGEGSNLGSNPRRDDGSGRDVSETLGVTPNPSNYSEAKIKVIGVGGGGSNAVNRMIESKMGGVEFWIVNTDIQAMRMSPVLPENRLQIGLELTRGLGAGGNPEMGMNAAKESKESIEEALFGADMVFVTAGMGGGTGTGGAPVIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGVTALRDNVDTLIVIPNDKLLTAVSESTPVTEAFNLADDILRQGVRGISDIIMIPGMVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEDGEGRPPQAAQLAQGDTTVGINRRSASFTSGGFVEIPEFLKKKGQTRYPRA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3475 487 ProSitePatterns FtsZ protein signature 2. 214 235 IPR020805 GO:0005525
Amo12g3475 487 SUPERFAMILY Tubulin C-terminal domain-like 321 434 IPR008280 -
Amo12g3475 487 SUPERFAMILY Tubulin nucleotide-binding domain-like 127 325 IPR036525 -
Amo12g3475 487 TIGRFAM ftsZ: cell division protein FtsZ 124 439 IPR000158 GO:0003924|GO:0005525
Amo12g3475 487 SMART Tubulin_4 128 322 IPR003008 GO:0005525
Amo12g3475 487 MobiDBLite consensus disorder prediction 91 119 - -
Amo12g3475 487 PRINTS Cell division protein FtsZ signature 215 235 IPR003008 GO:0005525
Amo12g3475 487 PRINTS Cell division protein FtsZ signature 243 264 IPR003008 GO:0005525
Amo12g3475 487 PRINTS Cell division protein FtsZ signature 306 328 IPR003008 GO:0005525
Amo12g3475 487 PRINTS Cell division protein FtsZ signature 329 350 IPR003008 GO:0005525
Amo12g3475 487 Gene3D Tubulin/FtsZ, GTPase domain 119 337 IPR036525 -
Amo12g3475 487 SMART Tubulin_C_4 324 441 IPR018316 -
Amo12g3475 487 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 3 485 - -
Amo12g3475 487 Hamap Cell division protein FtsZ [ftsZ]. 124 438 IPR000158 GO:0003924|GO:0005525
Amo12g3475 487 Pfam FtsZ family, C-terminal domain 339 433 IPR024757 -
Amo12g3475 487 Pfam Tubulin/FtsZ family, GTPase domain 128 289 IPR003008 GO:0005525
Amo12g3475 487 Gene3D - 338 445 IPR037103 -
Amo12g3475 487 CDD FtsZ_type1 139 431 IPR000158 GO:0003924|GO:0005525
Amo12g3475 487 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 3 485 IPR045061 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3475 Amo-Chr12 123967332 123970920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3475 218 426 PP2C-type Phosphatase Gene Family AT1G75010 23.744 1.07e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3475 K03531 - gmx:100784356 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3475 12 123967332 123970920 Amo12g3475 12 123967332 123970920 ECH