Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3473 ATGGCGACACCAGTGAACAGAAAAATCTCAGCTGCATCAGCTAGGGCTCATACCAGAAAGTCAAAGAAATCCTCTTCTCTTCAGCTCAATTCAGGGATCCTTAGAACAACACTGGTAGTATTGTTGATTGGGTTTCTAGCTTGGGCTTATCAAGTTACTCGACCTCCTCCCCCGAAGATTTGTGGCACTGCTGATGGCCCACCTGTAACAGCATCAAGAATCAAACTAAGAGATGGAAGACATTTGGCATACGAAGAGCACGGTGTTCCAAAAGATGCAGCCAAGTATAAGTTCATATATATACATGGTTTTGATAGTTGCAGGCATGATGCCGTGGTTGCCAAAAAGCTTTCACCTGATGTTATTGAGGACTTGGGGATCTACATTGTAGCTTTTGACAGACCTGGTTACGGTGAAAGCGATCCTGATCCCAACCGTACAATAAAGAGCATTGCCTTAGATGTAGAAGAGCTTGCCGATCAGCTTGGATTAGGATCAAAATTCTATGTGGTTGGTTTCTCCATGGGAGGACAGGTTGTTTGGAAGTGCCTTAAGTACATACCTCACAGGCTGGCAGGTGCAGTTCTTTTAGCCCCAGTTGTCAACTACTGGTGGCCTGATCTTCCGGCAAACCTAACTAACGAAGCCTATTACCGACAATTACTACAAGATCAATGGACACTTCGTGTTGCTCACTACACACCGTGGCTAACTTACTGGTGGAACACTCAAAAATGGTTCCCCGGATTAAGTTTAATTTATAATAATACAGATATCCTTTCAAGTCAAGATAAAGAGCTTACTTCAACAATTTGGTCTAATAAAAAGGGTCATGTGGCTCAGGCAAGACAGCAAGGAGAATACGAGACTCTCCACCGTGACTTAAATATCGGATTCGGTAAATGGGATTTTAGTCCTTTGGATCTTGAAAACCCGTTTCCAAATAATGAAGGTTCTGTCCATCTTTGGCATGGAGAGGAAGATTTGATGGTGCCTGTTATAGTGCAACGATACATCGCCGAAAACCTTCCCTGGATTCAGTATCATGAACTCAAAGGATCTGGTCACTTGTTCCCTTATCTTGATGGTATGAGTGATACTATCATTAAGTCACTTTTAGGTGCAAAGTAG 1131 0.4297 MATPVNRKISAASARAHTRKSKKSSSLQLNSGILRTTLVVLLIGFLAWAYQVTRPPPPKICGTADGPPVTASRIKLRDGRHLAYEEHGVPKDAAKYKFIYIHGFDSCRHDAVVAKKLSPDVIEDLGIYIVAFDRPGYGESDPDPNRTIKSIALDVEELADQLGLGSKFYVVGFSMGGQVVWKCLKYIPHRLAGAVLLAPVVNYWWPDLPANLTNEAYYRQLLQDQWTLRVAHYTPWLTYWWNTQKWFPGLSLIYNNTDILSSQDKELTSTIWSNKKGHVAQARQQGEYETLHRDLNIGFGKWDFSPLDLENPFPNNEGSVHLWHGEEDLMVPVIVQRYIAENLPWIQYHELKGSGHLFPYLDGMSDTIIKSLLGAK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3473 376 Pfam Alpha/beta hydrolase family 101 362 IPR000073 -
Amo12g3473 376 MobiDBLite consensus disorder prediction 1 23 - -
Amo12g3473 376 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 374 - -
Amo12g3473 376 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 374 - -
Amo12g3473 376 Gene3D alpha/beta hydrolase 63 372 IPR029058 -
Amo12g3473 376 SUPERFAMILY alpha/beta-Hydrolases 66 361 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3473 Amo-Chr12 123952502 123955518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3473 - - gmx:100500491 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3473 12 123952502 123955518 Amo12g3473 12 123952502 123955518 ECH
Amo12g3473 12 123952502 123955518 Amo18g0654 18 9109130 9111587 ECH