Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3462 ATGCAAACTTGGTTCCATTCCATTTCTATGTTAATTACAAAACACAGCAAGGTGATAGGAGCAAAATTCTTCCACTTAGAACAAAACGATTTTATGGACACAAATCTTAGCCCTATGGACGAAGAAGGCCACGGCACACACACGGCGTCCATAGCCGCGGGTGCGCTCGTTCGGAGAGCCAGTCTTTATGGCATCGGCCGCGGGACATCCCGCGGCGGGTCTCCGAACGCGCGCATAGCGGTGTACAAAGTGTGTTGGAACAGCGGATGCAGTGACATGGACTTATTGGCAGCGTTTGATGATGCAATTGCTGATGGTGTGAACTTCATATCTGTGTCTCTTGGAGGGAATCCAAGGGAGTTCTTCAGTGATCCAGTGGCCATTGGATCATTTCATGCAATGAAAAGAGGGATCTTAACAACATGTTCAGCTGGGAATGATGGTCCTTATGCTGAAACCGTTCAGAATGTTGCTCCATGGATTTTAACTGTGGCTGCTTCTTCTAGTGGTAGACAGTTTATAACACCGATATCCCTTGGTAATGGCAAAAAAGTTACGGGAGTATCTATAAACACCTTCTCCCCCAAGAAAAAAATGTATCCATTGATTAGTGGAGACCTAGCCATTAATGCTTCAGGGGATAGCTATGGCAATGCCAGTGCTTGTGATTATGGGACTCTAAGCAAAGACAAAGTGAAGGGAAAGATTGTGTACTGCCTTGGAGACACTGGAAATCAGGACTTAACCATAAAACAATTAGAGGGAGCTGGTCTTATTTCTGCTTCTGCTGTTAAAGCAGACTATTCCCCAGTCACAATTATTCCTAGTTCCACTGTTGATGCCTACACTCTGGGAAATAACATTTCTCTCTACATCAATTCCACCAAGAATCCTAAAGCTGTTATATACAAAACCACAAGCAAAACAGGCCAAGTTCCATATATTGCTTCTTTCTCATCTAGAGGACCTGAATTAATCACCTCCAAAATCCTCAAGCCTGATTTGGCTGCTCCAGGAGTTGACATTCTAGGTGGTTATTCAAAGTTGGAAACCATAACAACTTACCCTGAACCTGAGGACAACCGTTTTCAATCCTTTAATATACTGTCAGGAACTTCTATGGCTTGTCCTCATGCCACCGGCGCCGCCGCCTATGTGAAATCGTTCCACCGTGAATGGACTCCAGCTGCAGTCAAGTCTGCTCTCATGACCACCGCTATTCCCATGAAAGACTTTGCAGCTGAGTTAGGAACTGGTTCAGGAAGAATCAACCCTATAAGAGCATTGGACCCAGGCTTAATCTATGACATTAATTTGGACTCTTACATTGCATTCTTATGCAATGAAGGTTACAATAGCACAAGCATTGATATACTAGTTGGAAGCAAAGGCTTTAATTGTTCCACCATTAATAAACCGACACAAGGAAATGATGGAATCAATTACCCTTCAATGCATATTCAGGTTCCTTCCAATTCTACCATCTCAGCAACATTTTATAGGACTGTGACTAATGTTGGAACTGGAAACTCAACTTATAAGGCTAACATTACAGCACCAAAGGATCTTTCAGTTAAGGTTGAACCAAGTATATTGCAATTTAGTAAGATAAAACAAGAGTTGTCCTTTAAGGTTGTCATAAAGGGTCCTCAATTTCCAAAAGGGATAAAGGTATTATCAGCATCACTTGAATGGAATGATTCTAAACACAATGTTAGAAGCCCTATACTTATCTATAAACAAGGAAATGTGTACTGA 1758 0.4226 MQTWFHSISMLITKHSKVIGAKFFHLEQNDFMDTNLSPMDEEGHGTHTASIAAGALVRRASLYGIGRGTSRGGSPNARIAVYKVCWNSGCSDMDLLAAFDDAIADGVNFISVSLGGNPREFFSDPVAIGSFHAMKRGILTTCSAGNDGPYAETVQNVAPWILTVAASSSGRQFITPISLGNGKKVTGVSINTFSPKKKMYPLISGDLAINASGDSYGNASACDYGTLSKDKVKGKIVYCLGDTGNQDLTIKQLEGAGLISASAVKADYSPVTIIPSSTVDAYTLGNNISLYINSTKNPKAVIYKTTSKTGQVPYIASFSSRGPELITSKILKPDLAAPGVDILGGYSKLETITTYPEPEDNRFQSFNILSGTSMACPHATGAAAYVKSFHREWTPAAVKSALMTTAIPMKDFAAELGTGSGRINPIRALDPGLIYDINLDSYIAFLCNEGYNSTSIDILVGSKGFNCSTINKPTQGNDGINYPSMHIQVPSNSTISATFYRTVTNVGTGNSTYKANITAPKDLSVKVEPSILQFSKIKQELSFKVVIKGPQFPKGIKVLSASLEWNDSKHNVRSPILIYKQGNVY* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3462 585 ProSitePatterns Serine proteases, subtilase family, serine active site. 371 381 IPR023828 -
Amo12g3462 585 PRINTS Subtilisin serine protease family (S8) signature 40 53 IPR015500 -
Amo12g3462 585 PRINTS Subtilisin serine protease family (S8) signature 370 386 IPR015500 -
Amo12g3462 585 Gene3D Peptidase S8/S53 domain 15 442 IPR036852 GO:0004252|GO:0006508
Amo12g3462 585 ProSiteProfiles Serine proteases, subtilase domain profile. 1 429 - -
Amo12g3462 585 Pfam Subtilase family 28 407 IPR000209 GO:0006508|GO:0008236
Amo12g3462 585 CDD PA_subtilisin_like 177 302 - -
Amo12g3462 585 Gene3D - 170 308 - -
Amo12g3462 585 PANTHER CUCUMISIN-LIKE 12 580 - -
Amo12g3462 585 Pfam Fibronectin type-III domain 480 578 IPR041469 -
Amo12g3462 585 Gene3D - 446 581 - -
Amo12g3462 585 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 580 IPR045051 -
Amo12g3462 585 SUPERFAMILY Subtilisin-like 29 430 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3462 Amo-Chr12 123822861 123826635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3462 15 579 Subtilisin-like Serine Gene Family AT5G59190 45.550 9.93e-152 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3462 - - aip:107628055 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3462 12 123822861 123826635 Amo12g3462 12 123822861 123826635 ECH