Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3460 ATGAAGGTGATTGCTGCATATTTGCTTGCTGTTCTTGGAGGCAACAAAAACCCTTCTGCTAAAGACATCAAGGGCATCCTTGGCTCTGTTGGAGCAGAAGCAGAGGATAATATGATTGAACTGTTGATGTCTCAGCTGAAGGGGAAGGATATAACTGAGGTTATTGCTGCCGGCAGGGAACAGTTAGCCTCTGTGCCTTCCGGTGGTGGTGGTGGTGTCGCTGTTGCCGCTGCTCCCGCCGGAGGAGGAGGTGCTGCTGCTGCTGCTCCGGCAGCTGCTCCAGCTAAGAAAGAAGAAAAGGTGGAGGAAAAAGAGGAATCCGATGATGATATGGGCTTCAGTCTCTTCGATTAA 354 0.5085 MKVIAAYLLAVLGGNKNPSAKDIKGILGSVGAEAEDNMIELLMSQLKGKDITEVIAAGREQLASVPSGGGGGVAVAAAPAGGGGAAAAAPAAAPAKKEEKVEEKEESDDDMGFSLFD* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3460 117 MobiDBLite consensus disorder prediction 80 117 - -
Amo12g3460 117 Pfam 60s Acidic ribosomal protein 17 116 - -
Amo12g3460 117 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 117 IPR044076 GO:0002182|GO:0003735|GO:0022625
Amo12g3460 117 Hamap 50S ribosomal protein L12 [rpl12]. 2 117 IPR027534 GO:0003735|GO:0005840|GO:0006414
Amo12g3460 117 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 117 - -
Amo12g3460 117 CDD Ribosomal_P2 1 117 IPR044076 GO:0002182|GO:0003735|GO:0022625
Amo12g3460 117 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3460 Amo-Chr12 123806633 123808103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3460 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 71.429 4.01e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3460 K02943 - cit:102611784 119.398