Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3455 ATGGCTCAGAAGAAGAACAAGCACTTCTTACACGAGCTTCTAAGCGAAGATCAAGAGCCATTCCTCCTCAACAATTACATCTCAGACAAGCAAAACCAGCTCACAATTCATTTTTCTAAGCAAAAAACAGGAACCCTAAAAACCTCAACTTTATTCCCAATTCATCACCTCTGCAAGAACGCTCTCTGCTTCAATTACTCTTCCACAGCACCACCAACAACCACACCTGATATCACCAAATCCCCGCTATTCAGATTCTCGCAACGGAGTAGTACTAAGAGTCCGTGCAGTGCACGTGCTTCTTCGCCCAACGCAATGTTCCTTCATGTTCCTGCAAGAACAGCTTCCATTCTTCTAGAAGCTGCGCTTCGGATTCAGAAGCACTCCAATTCCAGAAACGCCAATGGATTTGGCTTCTTCGGTTCCTTCTTTAGGAGATTCACGCACAGGGGAAGAAGGAACAAGAGGCAAATTCAGAGTAATGATAACAATGCGAAGAGGAAGAAGAAGGTGAAGGATATCTTGAAATTCGAGCTAGATTTGGGAAGAAGAACAACAACAAAGGAAGAAGAAGAGAACAAGAAGAAGGAGAATGTTATGGTGGACACTAGTGGTGTGGGGTTCAGGTGTTCCTGCAGTGAAGAAGGAGTGTGTTCTTCGAGTAGTGTTCATGATGATGATGATGATAATGACTTATTCTGTGAAAGCCCTTTCCGTTTTGTTCTGCAACGGAGTCCTTCCGCCACCTCCTCCTCCGGCCGCCGTACGCCGGAGTTCTCCTCGCCGGCATCGTCTCCAAATCGCCACAGAACAGAGGACAAAGAACATAATAATAATAATGGAGATGATAGCATCAACAAATTCCAATCAGGGAAGCAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAACAATGTAGTCCTGTATCAGTTTTAGACCCACCATTTGAGGATGATGATGATGTTCACGAAAGCAATGATGATGATGAGGAAGGTTTTGATTTGGATTGTAGCTACGCCAATGTACAGAGAACAAAGCAACAACTATTATACCGGCTAAGTAGATTTGAGAAATTGGCAGAGTTAGATCCATTGGAACTTGAGCAAAGAATGTTAGATCAAGAAAACAACCAGTATGGAACATATATCAACGAGGATAGTTGCGGAGACGGTGATAGCGAAATGTCACATGAAGAAAAGGAACTGAGAGAAATAGTTTATGCAATCGTCAACCAATCAAGCAGATGGCGAGTTCCGGAGGATCTCAAGAGACTAGTTTATGATCTCATTATGGAGGAAGAGATTGCGGAATTTGATTGCCCAAGAGATAAGGAGATGGTGATAGAAAGGGTTTGTAAGAGGTTGGAACTATGGAAGGAAGTGGAGTCCAACACCATTGATATGATGATAGATGAGGACTTCTCAAGAGAGGAAAGTGGGTGGAAGAAAAATTCACAACAGGTAAGAGACTTGGCTGGAGAACTTGAGCTTGCTATCTTTGCCCTTTTAATGGAGGAATTTTCAGAGGAACTAGTTTATTGA 1539 0.4276 MAQKKNKHFLHELLSEDQEPFLLNNYISDKQNQLTIHFSKQKTGTLKTSTLFPIHHLCKNALCFNYSSTAPPTTTPDITKSPLFRFSQRSSTKSPCSARASSPNAMFLHVPARTASILLEAALRIQKHSNSRNANGFGFFGSFFRRFTHRGRRNKRQIQSNDNNAKRKKKVKDILKFELDLGRRTTTKEEEENKKKENVMVDTSGVGFRCSCSEEGVCSSSSVHDDDDDNDLFCESPFRFVLQRSPSATSSSGRRTPEFSSPASSPNRHRTEDKEHNNNNGDDSINKFQSGKQEEEEEEEEKEQCSPVSVLDPPFEDDDDVHESNDDDEEGFDLDCSYANVQRTKQQLLYRLSRFEKLAELDPLELEQRMLDQENNQYGTYINEDSCGDGDSEMSHEEKELREIVYAIVNQSSRWRVPEDLKRLVYDLIMEEEIAEFDCPRDKEMVIERVCKRLELWKEVESNTIDMMIDEDFSREESGWKKNSQQVRDLAGELELAIFALLMEEFSEELVY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3455 512 PANTHER OS04G0572500 PROTEIN 6 511 - -
Amo12g3455 512 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 6 511 - -
Amo12g3455 512 MobiDBLite consensus disorder prediction 244 334 - -
Amo12g3455 512 MobiDBLite consensus disorder prediction 267 281 - -
Amo12g3455 512 MobiDBLite consensus disorder prediction 313 334 - -
Amo12g3455 512 MobiDBLite consensus disorder prediction 244 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3455 Amo-Chr12 123747502 123751926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3455 1 511 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.208 1.82e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3455 - - ahf:112728865 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3455 12 123747502 123751926 Amo12g3455 12 123747502 123751926 ECH
Amo16g2308 16 94988278 94991373 Amo12g3455 12 123747502 123751926 PCT
Amo06g1602 06 52223329 52226502 Amo12g3455 12 123747502 123751926 PCT
Amo12g3455 12 123747502 123751926 Amo16g2308 16 94988278 94991373 PCT
Amo12g3455 12 123747502 123751926 Amo06g1602 06 52223329 52226502 PCT