Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3440 ATGGCTTGCATGTGGCTCAAGCAAGCTTGCAGTGGTGGCGGCTGTGGGAAGAAGCTTCCAGCCGATGTGCCACGAGGACACCTAGCCGTAACAGTTGGGGAAGCAAACCGGAGGTTCGTGATAAGGGCAGATTATTTGAACCATCCAGTACTACAACAATTGCTAGATCAATATGAAGGGCATGGATTCAACAAGAGTGGTCCTCTGTCTATACCTTGTGATGAGTTCCTCTTTGAGGACATAATTCAGTCCCTTAGAGGCGGTGGCACCGCAGCTGAATCACGTAGACCCTCTTGTCCCCATGTGCCAATGAAGGAGTCTACACCACTACTTCATAGCTTTGATAGCAAAAGGAGAAGTAGGAGCTAA 369 0.4905 MACMWLKQACSGGGCGKKLPADVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDQYEGHGFNKSGPLSIPCDEFLFEDIIQSLRGGGTAAESRRPSCPHVPMKESTPLLHSFDSKRRSRS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3440 122 Pfam Auxin responsive protein 17 85 IPR003676 GO:0009733
Amo12g3440 122 PANTHER AUXIN RESPONSIVE SAUR PROTEIN 1 113 - -
Amo12g3440 122 MobiDBLite consensus disorder prediction 88 122 - -
Amo12g3440 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3440 Amo-Chr12 123563027 123563917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3440 1 106 Calmodulin-binding Proteins AT4G34750 42.991 2.77e-23 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3440 12 123563027 123563917 Amo12g3440 12 123563027 123563917 ECH