Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3438 ATGGCCTCTTGCGACGACGACGACGACGACTTCTCTCTCCTCCACCAACCCTACGCGCCACCGTCCCACCACCACAACTACTCAACCGCCGTCGCCGCCGCCACAACCGCCGTACAACCTAAACCTGTCTCCGACACCGACGCCGAGGATTACAGCAATCCCTTCGACGAAGACACCACCACCACCACCCACGCCAACGCCAACACCACAGAGAAGAGAAAAGATCAAGACGAGATCGGCAACAACAATAACAGCAACGATGCATCGTACGGTTTCAACAAACGATCTAAGCTTTCCGCGAGCGCTTCCGGATCGGCATCCGCCTGCTCCGGCGCCGAGTACCGGAAAGACAGGGAGGAGTGGAGCGACACGGCGATCGTGTGTTTGCTAGATGCGTACACGGAGAAGTTCACCCAGCTGAATCGGGGGAATCTGAGGGGGAGGGACTGGGAGGAGGTGGCGGCGGTGGTTTCGGAGCGATGCGAGAACCAGTCGAAGAGCGTGGAGCAGTGCAAGAACAAAGTCGACAATCTGAAGAAGAGGTACAAACTCGAGAGGCACAGAATTAGCAGCGGATGCATCACGGCAAGCCACTGGCCTTGGTTCAAGCACATGGAGAATATCGTCGGGAACTCGCTTTCTGCAGGGAAGTTCCCCGGCGGCGACGAGGACAAGGCCATCGTGGCCTCCACTGCGGGGAACTCCCCTCGGCAACCGAAGAGATATGGAGGGGCATCACAAAGCAGTGGAGGACAAGTGAATAACATGAAGTCCAAAGCGTTGTCGAACCTTAGATGGCGAAGGGTAATCCTGAAAATTAGTGGTGCTGCCCTTACTGGATCTGATACCTGCAATATTGACCCAAAGGTAGCTATGTTAATCTCAAGAGAAGTTGCAATAGCCTCCCGCCTTGGTGTTGAGGTCGCCATTGTTGTTGGAGGTCGGAATTTCTTCTGTGGGGATGCATGGGTAGCTGCAACAGGATTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTATGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAAGTTCAGTCAGCATGCAAGAGTTTGCTGAACCGTACAATAGGCACCGAGCCATCAGACATCTTGAGAAAGGAAGAGTGGTTATATTTGGTGGAATTGGCTTTGGCACTGGAAATCCACTATTCTCAACTGACATAGCTGCAGCTCTTAGAGCTTCAGAGCTAAATGCTGAAGCTGTTCTCAAGGGTACCAATGTAGATGGTGTATATGACTGCAACTCCAGAGACAACAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTATCAAGAGGAGTCACTCCTATGGACATGACAGCACTGACATTCTGTGAGGAAAATGGTATTCCTGTTGTGGTTTTCAATATATTGGAGCCTGGGAACATATCAAAGGCTTTGTGTGGAGAACAAGTTGGAACGCTAGTTGACCAAACTGGAGCAATAAGCTAA 1518 0.5105 MASCDDDDDDFSLLHQPYAPPSHHHNYSTAVAAATTAVQPKPVSDTDAEDYSNPFDEDTTTTTHANANTTEKRKDQDEIGNNNNSNDASYGFNKRSKLSASASGSASACSGAEYRKDREEWSDTAIVCLLDAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRISSGCITASHWPWFKHMENIVGNSLSAGKFPGGDEDKAIVASTAGNSPRQPKRYGGASQSSGGQVNNMKSKALSNLRWRRVILKISGAALTGSDTCNIDPKVAMLISREVAIASRLGVEVAIVVGGRNFFCGDAWVAATGLERCTAYQVGMMATMMNSILLQSTLEKMGVQTRVQSSVSMQEFAEPYNRHRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVTPMDMTALTFCEENGIPVVVFNILEPGNISKALCGEQVGTLVDQTGAIS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3438 505 Coils Coil 161 188 - -
Amo12g3438 505 MobiDBLite consensus disorder prediction 231 255 - -
Amo12g3438 505 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 50 505 IPR011817 GO:0006221|GO:0009041
Amo12g3438 505 MobiDBLite consensus disorder prediction 1 92 - -
Amo12g3438 505 MobiDBLite consensus disorder prediction 28 42 - -
Amo12g3438 505 SUPERFAMILY Carbamate kinase-like 265 498 IPR036393 -
Amo12g3438 505 Gene3D - 261 499 IPR036393 -
Amo12g3438 505 Gene3D - 121 184 - -
Amo12g3438 505 CDD AAK_UMPK-PyrH-Ec 267 499 IPR015963 GO:0005737|GO:0006221|GO:0033862
Amo12g3438 505 PANTHER URIDYLATE KINASE 50 505 - -
Amo12g3438 505 Pfam Amino acid kinase family 268 478 IPR001048 -
Amo12g3438 505 Hamap Uridylate kinase [pyrH]. 264 499 IPR015963 GO:0005737|GO:0006221|GO:0033862
Amo12g3438 505 MobiDBLite consensus disorder prediction 230 255 - -
Amo12g3438 505 Pfam Myb/SANT-like DNA-binding domain 118 207 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3438 Amo-Chr12 123544091 123548003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3438 98 219 Trihelix Transcription Factor Family AT3G14180 37.302 7.37e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo12g3438 AA_kinase 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3438 - - gmx:100805176 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3438 12 123544091 123548003 Amo12g3438 12 123544091 123548003 ECH