Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3436 ATGGAATCCAACAATGAACTAGGTAGTGGCATGTTCTCTGTCATAGGTTCTAGTTTCTTAGGATTAGATCATAATAATAATAATAATAATAATAATAATAATAATAACCCTTCACAACAACAACAAAATCTTCAACATAGAAACCAACCCAAAATGGTTCAGTTTGGTTCTTCTTCTTCTTCTTCTCATCACCAACAAATCAATTATGATAATAATAATAATTCATCCAAGAACAAACACCAACAAGGTTCTCTAAGTGATGAAGATGAACAAGGATTCAATAATATAGATGTTGATGAGAGTAATAGTAACAAGATGAAGAACATTAGTAGTAGTATCTCACCATGGCAGAGAATGAAATGGACTAGTACCATGGTTAGGCTCTTGATAATGGCTGTTTACTACATTGGTGATGAAGTTGGCGGCGGCGGCGGCAGTAGTGGTGGTGGTTCATCAGAAACAAGTACTGATCCAAATGGGAAGAAAAAGATGATGATGAACAAGCAAGGAGGGGGGTTGATTCTTCAGAACAAGAAAGGGAAGTGGAAATCAGTGTCAAGAGCAATGATGGAGAAAGGTTTCTATGTTTCACCTCAACAATGTGAGGACAAGTTCAATGATCTGAACAAGAGGTACAAGAGGGTCAATGATGTTCTTGGAAGAGTAACAGCTTGCAAGGTTGTTGAGAATCAAAAGTTGTTGGAAACAATGGATCACTTGTCACCAAAGGCCAAAGAAGAAGTGAGAAAGTTGCTGAATTCAAAGCACCTTTTCTTTAGAGAAATGTGTGCTTATCATAATAGTTTTGGCCATGGTGGTGATAATGCATCTCAATCTCAATTACAACATGAACAAGGAGAGAAAGAAAAGGAAGAAAGATGCTTTCATTCTTCTTCTAAGTTGAAAATAGGGTGTGAAGAAGAGGATCATAATGATGATAGTGGTGACGACGACGATGACGACGATTCTGAGAACTATTTTGATGAGGATGAAGATGAATTAGGAGAAGGTGGTTCAAAGGGTCATCATGATCATCATCATGATCATAATAAGAGGCAAAAGAAATCATCATCATGTGAATTGATGAAAGAATTGAGCAATGAGGTGAATGGTGTTTTGGAAGATAAGGGAAAGAGTGTTTTGGAGAAGAAGCAATGGTTAAGGAGTAAGATAGTGAAGTTAGAGGAGAAGCAAATAAGGCATGAGGGACAAGGGTTTGAGATTGAGAAAGAAAGAATGAAATGGAGAAAGTATAGTAGCAAGAAGGAGAGGGAGATGGAGAGAGCAAAGTTTGAGAATCAAAGGAGAAGGTTAGAGATTGAGAGAATGATTTTGATCATTCACCAAAAGGAACTTGAATTGCAACATCAACAGCATCAATAG 1383 0.3709 MESNNELGSGMFSVIGSSFLGLDHNNNNNNNNNNNNPSQQQQNLQHRNQPKMVQFGSSSSSSHHQQINYDNNNNSSKNKHQQGSLSDEDEQGFNNIDVDESNSNKMKNISSSISPWQRMKWTSTMVRLLIMAVYYIGDEVGGGGGSSGGGSSETSTDPNGKKKMMMNKQGGGLILQNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDVLGRVTACKVVENQKLLETMDHLSPKAKEEVRKLLNSKHLFFREMCAYHNSFGHGGDNASQSQLQHEQGEKEKEERCFHSSSKLKIGCEEEDHNDDSGDDDDDDDSENYFDEDEDELGEGGSKGHHDHHHDHNKRQKKSSSCELMKELSNEVNGVLEDKGKSVLEKKQWLRSKIVKLEEKQIRHEGQGFEIEKERMKWRKYSSKKEREMERAKFENQRRRLEIERMILIIHQKELELQHQQHQ* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3436 460 Coils Coil 421 441 - -
Amo12g3436 460 MobiDBLite consensus disorder prediction 22 112 - -
Amo12g3436 460 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 13 459 - -
Amo12g3436 460 Gene3D - 121 214 - -
Amo12g3436 460 MobiDBLite consensus disorder prediction 274 358 - -
Amo12g3436 460 MobiDBLite consensus disorder prediction 142 164 - -
Amo12g3436 460 MobiDBLite consensus disorder prediction 283 309 - -
Amo12g3436 460 MobiDBLite consensus disorder prediction 310 334 - -
Amo12g3436 460 PANTHER F16F4.11 PROTEIN-RELATED 13 459 - -
Amo12g3436 460 Pfam Myb/SANT-like DNA-binding domain 118 264 IPR044822 -
Amo12g3436 460 MobiDBLite consensus disorder prediction 147 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3436 Amo-Chr12 123532729 123534577 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo12g3436 Myb_DNA-bind_4 9.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3436 - - ahf:112728885 753.436