Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3426 ATGCAACTCTCTTTGTTCCTCCATCATCACCACCACCCTATGCTCCTTCATAATTATTGCCCTCTTAACTCTCTTCACTTCACAAGGACACAAACAAGACTTTACAATAGGAATTCATATAAGGAAGAAGGGCATTGCTCAGTTGTCTCCTCATCACCACTTCTAAGAGGAGCAAAAATTCCTGAAACTGATTTTACAACCCTACCTAATGGCTTGAAGTACTATGATTTGAAGGTTGGGCAAGGAGCCGAGGCTGTAAAAGGATCTCGTGTCGCGGTTCACTATGTTGCTAAGTGGAGAGGTATCACATTTATGACTAGTAGACAAGGAATGGGAGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGAGAATCCGAGAGGGGAAATGTTCTCAAAGGGTTGGATTTAGGTGTACAAGGCATGAGAGTGGGAGGCCAGAGATTACTAATTGTTCCTCCAGAACTTGCCTATGGAAAGAAGGGAGTCCAAGAAATACCTCCAAATGCAACAATAGAGTTGGATGTTGAACTGCTTTCAATCAAACAAAGTCCATTCGGGACTGCGGTAAAGATTGTTGAAGGTTAA 588 0.4303 MQLSLFLHHHHHPMLLHNYCPLNSLHFTRTQTRLYNRNSYKEEGHCSVVSSSPLLRGAKIPETDFTTLPNGLKYYDLKVGQGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIELDVELLSIKQSPFGTAVKIVEG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3426 195 Gene3D - 54 189 IPR046357 GO:0003755
Amo12g3426 195 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 43 195 - -
Amo12g3426 195 SUPERFAMILY FKBP-like 62 182 - -
Amo12g3426 195 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 84 179 IPR001179 GO:0003755
Amo12g3426 195 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 43 195 - -
Amo12g3426 195 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 88 182 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3426 Amo-Chr12 123429562 123431601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3426 77 181 Calmodulin-binding Proteins AT5G48570 31.818 7.40e-07 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3426 12 123429562 123431601 Amo12g3426 12 123429562 123431601 ECH