Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3414 ATGGACCCCGACATTTCGCGGTGGCTTGCGGAATTCCAACTCCGGAGTTCCGCCCCCGACTCCGTCGTCGCCGACTTCCTTAAGTCCCTTAATCTCTCCAAACCCGATAACAAACTTAAGAAAACCCTCCTCCTCCGCATCCTCCAATCCGAAATCACCAATGCCTCAATCACCGAAGAGGCTCTTGAGGTACTCGAGGAAATTGAAGCCATTGACGGAAACGACGCCGTTCCGCTCCTCGATTTCATGCGCACAGCCTACTGCGCCATCGCCGTCGAATGCACAGTCAAGTACCTCTCCGCCACCTCCGACGGCGTTCCCAGCAAGGAGTACTTAGCCGCCATGGCGCGTATCTGGTTTGGGCGCGTGCTGAAATTGGAACATAGCCGGAGCAAGCTGTTCTCTTACGAGCTTGCACAGTGGATGGAGAACATCGAGGCTGCAGTTGTTGACACCGAGATTTATCAGAGGTTGGCGAAGTTGAATACGCGGTACGATGCGTTTTCCGCGGTTAGGGTTTATCTGCAGAAAGTTTGGGAAACGATGGGACCTTGTTTTCTTGACACGTTAGCGGAAATGACATTTAAGGGCATGAAGAAAGAATCGGCAAGTAGTGTTTTGTTGATGGAGGGTGTGGGGTTGAATGGTGGACATGAGGGGAAGGAACAGTTGGAGGAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCCTGCAAAGGGGGAAAAGGCAAGCCAGAAAGGTGATCCTCAACTTAAACGCAAGCTCCCTGCATTTCTTAGATGCCATAGAGGAGTTAATAAATCTATTGCTGAGGAATTGGGAACAGAACATTCAGGGAGCAAAAATGGTACCGAGTTTAGTGCTGAAGTTAAAGTAGCTGAGGAATCTCTTCCTGAGGCATTGAATGTATCTGATGCTGTTGGATTGAAACTTGCACAGAAAGGTACAAATCAAGAAGGACCCATGGAAAACATGAGTGTGGATGTAGATGTGCCCAACTTAAATACTTCCAGGGCTATTGTTCTTTTTCAACCTAACAATGCCGATCATGAGAAGAAGTCTTCTGTTCATCATAGTAGAGTTCAAGTTCAGTGTCCCAATTTAATGGAGGAGAACAATACTGCTCATGAAAGCTCCAATTTGATGGAGCAAAACAGCACTGCTCAAGAAATCCCCAATTTGATGGAGCAGAACAGCACTGCTCATGAAATCCCCAATTTGATGGAGCAGAACGGCAGTGCTCATGAAATCCCCAATTTGATGGAGCAGAACAGCACTGCTCATGAAAGCCCCAATTCGATGGAGAAGAACAGTACTACTCGTAGGTATAAGAGGGATAATTCAAAAGATAATCCTACTGGAGTGCAACTAAGAAGGAAGCAAAGAAGATGGTCTCCAATGGAAGAGGACGCACTAAGAATTGGTGTGGAAAAGTTTGGCTCAGGAAACTGGAAAGCAATTCTGAGTTTTTACAGTAACATATTTCAAGATAGAAAAGCAGTATGTAATATATTCCCCAAAGTGGTTTGCCTTGTTTCTTTCTTGATGTAA 1554 0.4646 MDPDISRWLAEFQLRSSAPDSVVADFLKSLNLSKPDNKLKKTLLLRILQSEITNASITEEALEVLEEIEAIDGNDAVPLLDFMRTAYCAIAVECTVKYLSATSDGVPSKEYLAAMARIWFGRVLKLEHSRSKLFSYELAQWMENIEAAVVDTEIYQRLAKLNTRYDAFSAVRVYLQKVWETMGPCFLDTLAEMTFKGMKKESASSVLLMEGVGLNGGHEGKEQLEERAEGSVDGTQEPAKGEKASQKGDPQLKRKLPAFLRCHRGVNKSIAEELGTEHSGSKNGTEFSAEVKVAEESLPEALNVSDAVGLKLAQKGTNQEGPMENMSVDVDVPNLNTSRAIVLFQPNNADHEKKSSVHHSRVQVQCPNLMEENNTAHESSNLMEQNSTAQEIPNLMEQNSTAHEIPNLMEQNGSAHEIPNLMEQNSTAHESPNSMEKNSTTRRYKRDNSKDNPTGVQLRRKQRRWSPMEEDALRIGVEKFGSGNWKAILSFYSNIFQDRKAVCNIFPKVVCLVSFLM* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3414 517 PANTHER MYB TRANSCRIPTION FACTOR 1 502 - -
Amo12g3414 517 SUPERFAMILY Homeodomain-like 459 501 IPR009057 -
Amo12g3414 517 MobiDBLite consensus disorder prediction 216 252 - -
Amo12g3414 517 Gene3D - 456 503 - -
Amo12g3414 517 MobiDBLite consensus disorder prediction 425 467 - -
Amo12g3414 517 CDD SANT_TRF 463 502 - -
Amo12g3414 517 MobiDBLite consensus disorder prediction 439 467 - -
Amo12g3414 517 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3414 Amo-Chr12 123319347 123323927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3414 5 212 Single Myb Histone (SMH) Gene Family AT1G15720 29.464 4.30e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3414 - K11111 adu:107476251 975.311