Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3385 ATGGCAACTCCACAAGACTCCGCTTCCACCAAAACTGAGAGGGTCGTTGTGAAGGGGAAGGTGCAGGGTGTCTTCTACAGGAACTGGACCATTGAGAACGCTACCCAGTTGGGCCTTAAAGGATGGGTCCGTAACCGCCGTGACGGCTCCGTCGAGGCCCTCTTCTCCGGCCCCTCAGACGCCGTCCAGGAGATGGAGCAAAGGTGCCGACGTGGCCCGCCTGATGCCATCGTCACCGGTTTCGAGGCTTTTCCTTCCACGGATGATCCTGGCAATGGCTTCGAACGCAAACCAACTAGCTTTGTCCACCTGATCATGGCAAAGACTAGTGTTTGTGGAAGATTGTTGAAGGGGGGCTTTGGAGGAATGTTGCTCATAATGAGGAAACTGAGGACTAGCTTAACACATTCAAAAGGGGTAAAACAAGGTCACTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAGAGGTTCTTCATCAAATTGAGCTATTTGGATCACCCTGAATTTGTGAAGTTGCTAGAGCAGGCTGAAGAAGAGTTTGGATTCTCTCAGGTGGGAGCATTGGAAATTCCTTGTGAGCCTGATGAGTTGAAGAGAATCATTAGAAGTAAACTAACAAAGCATTGA 630 0.5016 MATPQDSASTKTERVVVKGKVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGPSDAVQEMEQRCRRGPPDAIVTGFEAFPSTDDPGNGFERKPTSFVHLIMAKTSVCGRLLKGGFGGMLLIMRKLRTSLTHSKGVKQGHFVVIATQGWKPERFFIKLSYLDHPEFVKLLEQAEEEFGFSQVGALEIPCEPDELKRIIRSKLTKH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3385 209 PRINTS Acylphosphatase signature 12 27 IPR020456 GO:0003998
Amo12g3385 209 PRINTS Acylphosphatase signature 33 58 IPR020456 GO:0003998
Amo12g3385 209 ProSitePatterns Acylphosphatase signature 2. 41 57 IPR017968 -
Amo12g3385 209 Pfam Auxin responsive protein 135 203 IPR003676 GO:0009733
Amo12g3385 209 PANTHER ACYLPHOSPHATASE 4 99 - -
Amo12g3385 209 Gene3D - 1 97 - -
Amo12g3385 209 ProSiteProfiles Acylphosphatase-like domain profile. 12 98 IPR001792 -
Amo12g3385 209 SUPERFAMILY Acylphosphatase/BLUF domain-like 11 96 IPR036046 -
Amo12g3385 209 Pfam Acylphosphatase 14 94 IPR001792 -
Amo12g3385 209 PANTHER ACYLPHOSPHATASE 4 99 IPR020456 GO:0003998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3385 Amo-Chr12 123003376 123006148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3385 118 203 Calmodulin-binding Proteins AT2G24400 38.372 4.86e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3385 K01512 - gmx:100796414 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3385 12 123003376 123006148 Amo12g3385 12 123003376 123006148 ECH