Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3384 ATGATTAGGGCTTTTGTTGGGAGCATAATAAGAAAGGGTCTCTCAGTGTTGTTTGTAGCAATAAGGGGAAGTGGTAGTTCAGAAGAACATTTGATGTATTTCAATGATGAAGTTGATGATGAAACTGTGGAAGGGTATTTCACTGTTCTTGCCACAAAGGGCAAAGAAACAAGAAGGTTCAGTGTTGAGTTAGATTGCTTGACTGATCCTGCATTCTTGGGACTTCTTGATCAAGCTCAAGAAGAGTATGGCTTCAGACAGAAAGGAGCTATTTCTTTTAACAGTTGGCTAAGGATTATACCAATTACCAACAAGGATTACTTGCTCACTTTAATCTTTAGTCAATTGGTTGTTAATGGGATTGGTTTTGCTAATATTGCTCGACAAAACAAACATCACCAAATTCATCCATGCTTTTCTTCCTACTATCTTGGAAAGGTGAAAAGGGGTATCTCAAACTTGGTGCATCACAGAAGGGCTAAATCACTAAGTTACATTAGTGATGATGATGAAGATGGTAGAGAGAAAAAGAGGTTCAGTATTGAGTTGGATTACCTGAATGATCCTGAATTCAAGTTGCTGCTTGATCAAGCTCAGCAAGAATATGGTTTCAGACAGAAGGGAGCTCTTTCTGTCCCTTGCAGGCCTCATGAACTCCAAAAGATTTTGGATGGTGGCAATGAAAGAAGGTTGAGTAGGTCATAA 705 0.3901 MIRAFVGSIIRKGLSVLFVAIRGSGSSEEHLMYFNDEVDDETVEGYFTVLATKGKETRRFSVELDCLTDPAFLGLLDQAQEEYGFRQKGAISFNSWLRIIPITNKDYLLTLIFSQLVVNGIGFANIARQNKHHQIHPCFSSYYLGKVKRGISNLVHHRRAKSLSYISDDDEDGREKKRFSIELDYLNDPEFKLLLDQAQQEYGFRQKGALSVPCRPHELQKILDGGNERRLSRS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3384 234 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 171 226 - -
Amo12g3384 234 Pfam Auxin responsive protein 173 223 IPR003676 GO:0009733
Amo12g3384 234 Pfam Auxin responsive protein 37 92 IPR003676 GO:0009733
Amo12g3384 234 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 93 - -
Amo12g3384 234 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 171 226 IPR003676 GO:0009733
Amo12g3384 234 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3384 Amo-Chr12 122989518 123000023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3384 173 229 Calmodulin-binding Proteins AT2G24400 40.351 2.94e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3384 - K14488 adu:107476287 183.341