Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3376 ATGAATGGGATGAGGAATAATAATGGTAGTTCTTATTCCTCCTCGGTAGCTACTCTTGTTTTCTTGGTGTTGTTTTTTGTATCATTGAGTTTGCTACCAACTAGGATTCAATGTGCGGATCAACCATATGTAACCTCGTTTTATGCTGAGGAAATCTATAAAGAACTTCAGAGTCTTGCAACGCTTTTTACTAGCGACATTAGAAAAACTTTAAGCTTCTGCATAAAGGACATGAAAAAAGATTGGGAGGAAGCTTTTGATTTTAAGGGGAGGTTAGACTTTGTGGATTCTTGTGTAAAGAAAAAAGGAGATTTCAGAGATAGAATATGCACTTCAGTTGAAATAAGGTACTATTTTCAGAGTTTTATGGATACAACAGGAACTACATCTCAGAGTTATGTGAAACCGAACAAGAATTGCAATCTGTCATCATGGGTTGCTGGTTGTGAACCTGGTTGGGGATGTAGTGTTGGAAGCACTGTTGACCTCAAAAAGGAATTACCTGAGATTCCTTCTAGAATTGATAATTGTCAACCTTGTTGTGAGGGTTTCTTTTGCCCTCAAGGCTTGACTTGCATGATACCTTGCCCACTAGGCTCTTATTGTCCAATTGGGAAACTGAATACAACCACTTCAACATGTGAACCATATAGCTACCAGATACCTGCAGGAGATCCAAACCATGCATGTGGAAGTGCAGATGTATGGAGTGGAGTTGTGAACAACAGTGATATCTTTTGTGATCCAGGATCATATTGCCCAACTACAACACGTAAAGTGGCTTGTGATCGTGGATATTACTGCAGAAGGGGTTCCACTCGCCAAAATTCATGCTCCATGTTGAGTTCCTGTAAAGCAAACACAGAAAGCCCAAATATGCATGCTTATGCTGCTTTGCTTATTGTTGCACTGAGTACTCTGCTGATCTTCATTTACAACTGTACTGATCAAATTCTAGCAACAAGAGAAAAGCTAAAGGCGGATTCTAGAGAGCGAGCTGCCAAGCATGTGAAAGAGATTGCACAAGCAAGACAAAGATGGAGATCAGCCAAAGATAGCATTACAAAGAAGAAAGGTTTGCAAGAACAATTAAGATCCTTTTCGCGCCGAAAATCCATGAAACAGGACACTACTAATCCTGCTGCTGCTGCTTCTCCTCTGCCACCTTCGGACAACTCTTCTGAGAAAAAGGAAAGCAACCTCACAAAGATGATGAACTCGGCTGACAGTGATTTGAACAGCAGCGAAGGATTCCACTTGAACATTGGAGATAAGAACCTGAAGAACAAGCAACCAAAGGGTAAAAATCTGCACACACAAAGCCAGATTCTAAGGTATGCTTATGGGAAGATTGAGAAGGAGAAAGAACAAGAACAGAGCAATAACTTAACATTCTCTGGAGTTATATCAATGGCTACTAATGTTGATGAAGAGATTAAAGCAAGGCCAGCCATTGAAGTTTCATTCAAGGATTTGACTCTAACTTTGAGAGGGAAAAAGAAGCATCTTCTAAGGTGTGTGACAGGTAAACTGATGCCTTGTAGAGTGTCAGCTGTGATGGGACCCTCTGGAGCTGGCAAGACCACTTTTCTTTCTGCTTTGGCTGGCAAAGTTAGAGGTTGCACCATGACTGGATCTATTCTTATCAATGGCAAACATGAATCCATTCATTGTTATCAAAAGATTATCGGTTTTGTGCCTCAAGATGATATTGTCCATGGTAACTTGACCGTGGAGGAGAATCTTCGCTTTAGCGCAAGATGCAGGTTGTCAGCAGACATGGCAAAAGCAGATAAGGTTCTGATTATAGAGAGAGTAATAGAGACATTAGGACTGCAAGCAATAAGAGATTCCCTTGTTGGGACAGTGGAAAGGAGAGGAATATCAGGAGGACAAAAGAAGCGTGTGAATGTGGGATTAGAAATGGTGATGGAGCCTTCACTATTGATATTAGATGAACCTACAACAGGTCTTGATAGTGCTTCATCCTCATTGCTTCTTAAAGCTCTTAGGCGTGAAGCCCATGAAGGGGTTAACATATGCATGGTACTTCACCAACCAAGCTATACATTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGGGGGCTTACTGCATATCATGGACCAGTGAAGAAAGTTGAGGAATACTTTGCTAGCATTGGAATCCCTGTCCCTGACCGTGTGAATCCCCCTGACCACTTCATTGATGTTTTGGAAGGTATTGTGAAGCCTTCTTCCGGTGTCACATACCAGCAGCTTCCCATCAAGTGGATGCTCCATAATGGTTACAATGTTCCTCCTGATATGCTTCATGTAATGTCTGAAAACCATGATCCTGAATCTTCATCCAAGGGTGAAGCTGAAGGTGGTGGTGAAGAGCAATCAGAGCATCATTGGGATAGTGTTGAGATAGAGAAAGATCATGTAGACTCAAACTTTTTGATCGTTAAGGATTTGTCCAATAGAAGAACACCTGGTGTATTTCGACAATATAGATACTATCTTGGCAGGGTTGGTAAGCAGCAACTACGAGAAGGAAAATCTCAAGCAGTTGATTATCTACTTTTGTTAGTTGCTGGTGCGATCTTAGGAATGCTAACTACAGCCAATGATGAAACGTTTGGTTCCCTTGGATATACATTCACAGTTATTGCTGTGTCTCTTAGATCATTTTCACTTGACAAATTACAGTACTGGAGGGAAAGTGCATCAGGGATTAGTAGTCTTGCTCATTTTATGTCCAAAGACACAATTGATCTTTTCAACACAGTAATCAAGCCTGTGGTGTATCTATCCATGTTCTATTTCTTTAGCAATCCAAGGTCAAGCTTTGCAAGTAACTATGTGATTCTGCTTTGCCTTGTCTACAGTGCTACTGGCATGGCTTATATATTAGCAATTTACTTGGCTCCTTCTGCTGCACAACTGTGTTCAGTGCTATTTCCTGTGGTTATGACTCTGATTGCAAGCCAAAAGAGAGACACAACACTGATGAAGATCCTAGCAAAACTGTGCTACCCAAATTATGCATTAGAGGCCTTTGTAGTTGCAAATGCTGAAAGAATTCTCGCCTTTGGTTGTCTCTTGATCACACAAAGGAAGTAG 3114 0.4094 MNGMRNNNGSSYSSSVATLVFLVLFFVSLSLLPTRIQCADQPYVTSFYAEEIYKELQSLATLFTSDIRKTLSFCIKDMKKDWEEAFDFKGRLDFVDSCVKKKGDFRDRICTSVEIRYYFQSFMDTTGTTSQSYVKPNKNCNLSSWVAGCEPGWGCSVGSTVDLKKELPEIPSRIDNCQPCCEGFFCPQGLTCMIPCPLGSYCPIGKLNTTTSTCEPYSYQIPAGDPNHACGSADVWSGVVNNSDIFCDPGSYCPTTTRKVACDRGYYCRRGSTRQNSCSMLSSCKANTESPNMHAYAALLIVALSTLLIFIYNCTDQILATREKLKADSRERAAKHVKEIAQARQRWRSAKDSITKKKGLQEQLRSFSRRKSMKQDTTNPAAAASPLPPSDNSSEKKESNLTKMMNSADSDLNSSEGFHLNIGDKNLKNKQPKGKNLHTQSQILRYAYGKIEKEKEQEQSNNLTFSGVISMATNVDEEIKARPAIEVSFKDLTLTLRGKKKHLLRCVTGKLMPCRVSAVMGPSGAGKTTFLSALAGKVRGCTMTGSILINGKHESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMAKADKVLIIERVIETLGLQAIRDSLVGTVERRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREAHEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFASIGIPVPDRVNPPDHFIDVLEGIVKPSSGVTYQQLPIKWMLHNGYNVPPDMLHVMSENHDPESSSKGEAEGGGEEQSEHHWDSVEIEKDHVDSNFLIVKDLSNRRTPGVFRQYRYYLGRVGKQQLREGKSQAVDYLLLLVAGAILGMLTTANDETFGSLGYTFTVIAVSLRSFSLDKLQYWRESASGISSLAHFMSKDTIDLFNTVIKPVVYLSMFYFFSNPRSSFASNYVILLCLVYSATGMAYILAIYLAPSAAQLCSVLFPVVMTLIASQKRDTTLMKILAKLCYPNYALEAFVVANAERILAFGCLLITQRK* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3376 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 710 IPR027417 -
Amo12g3376 1037 MobiDBLite consensus disorder prediction 775 801 - -
Amo12g3376 1037 Gene3D - 474 723 IPR027417 -
Amo12g3376 1037 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 1026 - -
Amo12g3376 1037 ProSitePatterns ABC transporters family signature. 628 642 IPR017871 GO:0005524
Amo12g3376 1037 Pfam ABC-2 type transporter 685 1033 IPR043926 GO:0140359
Amo12g3376 1037 Coils Coil 326 346 - -
Amo12g3376 1037 Pfam ABC transporter 507 655 IPR003439 GO:0005524
Amo12g3376 1037 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 41 1026 - -
Amo12g3376 1037 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 728 IPR003439 GO:0005524
Amo12g3376 1037 MobiDBLite consensus disorder prediction 373 419 - -
Amo12g3376 1037 MobiDBLite consensus disorder prediction 344 372 - -
Amo12g3376 1037 SMART AAA_5 513 705 IPR003593 -
Amo12g3376 1037 MobiDBLite consensus disorder prediction 344 419 - -
Amo12g3376 1037 CDD ABCG_EPDR 484 711 - -
Amo12g3376 1037 MobiDBLite consensus disorder prediction 776 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3376 Amo-Chr12 122946655 122950788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3376 474 688 Calmodulin-binding Proteins AT2G36910 27.727 1.71e-12 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3376 12 122946655 122950788 Amo12g3376 12 122946655 122950788 ECH