Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3374 ATGAAGACAAGGTTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGGGAAGCAAAGTGATACCTTGTACTACTGTGTCTGATTCTTGCGACCAATGTTACCTTAAAAAATACACTAACTTGTGGCCTTCATCTTCTAATTCATTGGATAAGAGATGCTCCATTCCAAATGATGTTCCAAAGGGTCACTTGGTAGTGTATGTTGGAGAAGAACACAAGAGATTTGTGATCAAAGTTGCATTGCTTCACCATCCACTCTTTAGGGCCTTGTTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCCGATTCCAAACTATGCATTCCTTGTGATGAACACATCTTCCTCAGTGTTCTTCGCTGTGCAAGTTCTCCACAGAATGATCGTGTGTGTTTCTGTCTTTATCTCTGA 411 0.4039 MKTRFLRGCLNKCKKMGSKVIPCTTVSDSCDQCYLKKYTNLWPSSSNSLDKRCSIPNDVPKGHLVVYVGEEHKRFVIKVALLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHIFLSVLRCASSPQNDRVCFCLYL* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3374 136 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 134 - -
Amo12g3374 136 Pfam Auxin responsive protein 47 121 IPR003676 GO:0009733
Amo12g3374 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3374 Amo-Chr12 122936865 122937275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3374 57 129 Calmodulin-binding Proteins AT4G34750 45.455 3.93e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3374 K14488 - gmx:100812927 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3374 12 122936865 122937275 Amo12g3374 12 122936865 122937275 ECH