Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3369 ATGAGATTTGGGAGAACCAGATTGTCTCTAATAAAATTAGATCATATATTTGAAGTAGAGAAGAAGAGAACTATGGCTTCTGGTGGTAGATCAAGATCTTCTGTAAGGTTTCATGATGATGTTGAGACAGAGAAGTTAACAGAAAGCAAGGAAAAGAGCCACTTATCAATGCATGGCTATAACAAGATAATGAGCGGAAAAGAGAATAATAGGAAGGATGCAACAAGAGGAAAGTGCCTGGAGAGAAGAAGAGAACTATCTAGAGTGTTCTCAGAGGATTATGATGCAGATGAGATTCTGATATTGGATCCAAGGGGTCCAAGAGTGAATAGATGGAACAGGATTTTCTTAGTAGCATGCTTGATTTCATTGTTTGTGGATCCTTTGTTCTTTTACTTGCCAGTGGCCAAGAAAGAAATGTGCATTGACATGTCTATTGGTCTTGAAGTTTCCCTCACCATAATCCGGTCCATGGTTGATGCATTTTACATTATTCAGATTTATGTAAGGTTTCAAACTGCTTATGTGGCGCCTTCTTCGCGTGTTTCTGGTAGAGGAGAGCTTATCATAGACTCCTCCAAGATTGCATCACAGTATATGCATAAGGACTTTTGGATTGATCTACTGGCTGCACAGCCTCTTCCACAGGTGGTTATTTGGACCGTAATTCCAAATCTAAAGGGGTCACAAATGTTTGCTTCAAGGCATGTTCTGAGCATGGTTACCATTTTTCAGTACCTCTTGAGGCTATATCTGATTTATCCACTCTCACATGAAATCATCAAGACTAAAGGGGTAATGATGGAGAAAGCTTGGGCTGGTGCAGCATATAATCTTATGCTCTATATGCTAGCAAGTCATGTTTTAGGATCATGCTGGTATCTGCTGTCAATTGAAAGGCAAGATGAGTGTTGGAAGAAAGTTTGTAATCTTGAGTACCGAAATTGCAAGTACCATTATCTTGAATGTGAAAGCATAGGGGACCTAAGTAGGACTTCATGGCTCAAATCAAGCAATATCTCAAGCCTTTGTGATCAGGACAGTGATTTCTTTCAGTTTGGTATTTTTGCTGATGCTCTTTCTTTGGAAGTTACAGCCTCAGAATTCTTCAGCAAATACTATTATTGTCTTTGGTGGGGACTGAGAAATCTTAGCTCTTTAGGACAGAATCTCTTGACAAGCACGCAAGTCACAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTGTTTGCATTGCTCATAGGCAATATGCAAACATATTTGCAATCAACAACAATGAGACTAGAAGAATGGAGAATAAGGAGAACAGATACAGAAAGATGGATGCACCATAGGCAACTCCCTCGGCATCTGAAGCAAAATGTGAGAAGGTATGACCAATTGAGATGGGTTGCCACTCGTGGTGTTGATGAAGAAGCCATTCTTAGAGACCTTCCTGCTGATCTTAGACGTGACATTAAGCGCCACCTTTGTCTCAATCTTGTTCGCCAAGTACCATTATTTGATCAGATGGATGAGAGAATCCTAGATGCAATATGTGAGAGGCTAAAACCGTCACTATGTTCCCAAGGGACATGCCTTGTCCGTGAAGGTGACCTTGTTCATGAGATGTTCTTCATAGTAAGAGGCCATTTAGATTCTTGCACCACCAATGGTGGCCGAACCGGATTCTTCAACTCGTGTCGAATTGGGCCCGGTGACTTCTGCGGTGAGGAGCTTCTCACATGGGCCTTGGACCCACGTCCAACTGTGGCCCTTCCTTCATCAACAAGAACAGTGAGGGCCATAACTGAAGTTGAGGCCTTTGCACTAATTTCTGAAGACTTGAAATTTGTGGCGGCCCAATTCAGAAGGTTACATAGCAAGCAACTTAGGCAAACTTTCAGGTTCCATTCTCATCAATGGAGAACATGGGCTGCATGTTTTATACAAGCAGCTTGGTTTAGGTATAAGAGAATCAAGGAGACAAGTGAGCTCCAGAGAAAGGAGAGTCCAATGATGATCATGATGGCCTGTGGGCCTCGAAATGGGCCTGAGCACTTCTCTGCACCCTTGCAGCCCATGACTGGATCAAGTTTAAGTATGTATTCATCAAAATTGGCAGCAAGCCCAAGGAGAGGTATGAGCCTAAGACATGGGCCTGAGTTTGATATGTTTTTTGGGTCATTGAAGAAGCCACTTGAACCAGACTTTACAGATGAAGATGATGATAATGATGATGATAAGTAA 2241 0.419 MRFGRTRLSLIKLDHIFEVEKKRTMASGGRSRSSVRFHDDVETEKLTESKEKSHLSMHGYNKIMSGKENNRKDATRGKCLERRRELSRVFSEDYDADEILILDPRGPRVNRWNRIFLVACLISLFVDPLFFYLPVAKKEMCIDMSIGLEVSLTIIRSMVDAFYIIQIYVRFQTAYVAPSSRVSGRGELIIDSSKIASQYMHKDFWIDLLAAQPLPQVVIWTVIPNLKGSQMFASRHVLSMVTIFQYLLRLYLIYPLSHEIIKTKGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQDECWKKVCNLEYRNCKYHYLECESIGDLSRTSWLKSSNISSLCDQDSDFFQFGIFADALSLEVTASEFFSKYYYCLWWGLRNLSSLGQNLLTSTQVTEINFAVIVAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTERWMHHRQLPRHLKQNVRRYDQLRWVATRGVDEEAILRDLPADLRRDIKRHLCLNLVRQVPLFDQMDERILDAICERLKPSLCSQGTCLVREGDLVHEMFFIVRGHLDSCTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPTVALPSSTRTVRAITEVEAFALISEDLKFVAAQFRRLHSKQLRQTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELQRKESPMMIMMACGPRNGPEHFSAPLQPMTGSSLSMYSSKLAASPRRGMSLRHGPEFDMFFGSLKKPLEPDFTDEDDDNDDDK* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3369 746 SUPERFAMILY cAMP-binding domain-like 434 626 IPR018490 -
Amo12g3369 746 CDD CAP_ED 504 635 IPR000595 -
Amo12g3369 746 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 41 737 - -
Amo12g3369 746 MobiDBLite consensus disorder prediction 725 746 - -
Amo12g3369 746 Gene3D - 115 428 - -
Amo12g3369 746 PANTHER PROTEIN CNGC15A 41 737 - -
Amo12g3369 746 SUPERFAMILY Voltage-gated potassium channels 103 426 - -
Amo12g3369 746 Pfam Ion transport protein 112 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo12g3369 746 ProSiteProfiles cAMP/cGMP binding motif profile. 504 587 IPR000595 -
Amo12g3369 746 Gene3D Jelly Rolls 502 622 IPR014710 -
Amo12g3369 746 SMART cnmp_10 504 635 IPR000595 -
Amo12g3369 746 Gene3D Helix hairpin bin 431 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3369 Amo-Chr12 122905056 122909823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3369 75 738 Ion Channels AT2G28260 64.006 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3369 K05391 - gmx:100815543 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3369 12 122905056 122909823 Amo12g3369 12 122905056 122909823 ECH