Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3354 ATGTTGCCAAAGGATTTACTTTGGTTACTTTCAGCTAGTTTCTTTAAAATAGTTAGTCATTTGTCTATACTTACTAATTTCTTTCATTACAGAATGGCATCAAACAGGGGTCAAGGTGGAATTCAACAATTGTTGGCTGCTGAACAAGAAGCACAAAGGATTGTAAATGCCGCTAAAAATGAAAAATTGACAAGGTTGAAACAAGCCAAAGAAGAGGCAGACAAGGAGGTTGCAGAATACAGAGCTCAACTGGAACGTGAGTTTCAACAAAAAGTATCAGATAGCACTGGAGATTCTGGTGCTAATGTGAAGAGGCTTGAACATGAAACTGAAGGGAAAATCCATCACCTGAAAACAGAAGCCGCAAGAATTTCTGATGATGTTGTAGCCATGCTTCTCAAGACAAATAAAGTACCTTCCAAAATCACATAA 432 0.3773 MLPKDLLWLLSASFFKIVSHLSILTNFFHYRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLTRLKQAKEEADKEVAEYRAQLEREFQQKVSDSTGDSGANVKRLEHETEGKIHHLKTEAARISDDVVAMLLKTNKVPSKIT* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3354 143 Coils Coil 41 90 - -
Amo12g3354 143 Gene3D - 31 140 - -
Amo12g3354 143 Pfam Vacuolar (H+)-ATPase G subunit 38 135 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo12g3354 143 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 37 135 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo12g3354 143 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 32 135 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo12g3354 143 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 32 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3354 Amo-Chr12 122703835 122709647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3354 39 134 Primary Pumps ATPases(2) AT4G23710 67.708 1.57e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3354 K02152 - gmx:100306550 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3354 12 122703835 122709647 Amo12g3354 12 122703835 122709647 ECH