Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3351 ATGAAGCAAGGAAGTATGAGTCCTAAAACAAGAATGGGAATTACTATTACTATTCTCATCTTCACCCAAATCTTGCTCTGCATTCATGCTACTGAAACAGATATATTCTGTTTAAAATCCATCAAGGATTCCTTGGAAGATCCATATAATTTCTTAGCTAGCTGGGACTTCATATTAACATCCACTATGAAGTTTGAAGAACTAAATGATGCAAAAGATGGATTTTCTATAAACAATGCAATTGGGTTTGGAAAGATGGGAATAATGTACAAGGGAACATTGGCTAACGGTTGGCACCTAGCCATTAAGAAACTAACTGATTCTCAACAATTTGGGAGACAAGTTCTTATAGAAATAAGGATTCTAGGTAAGCTCCGACACAGAAACATAGTTCCCCTGCTTGGGTTCTGCATTGATAACGATGAAAGGATTCTGGTGTACCCCTACTTCTCAAATGGAAGACTCTCGAAATGGTTGCACCCTTTGGAAACTGAGGCTATGATATTGACATGGCCACAGAGGATTAACATTGCACTAGGTGTGGCTAGAGCCTTATCTTGGCTCCATCATTTATGCAATCTGCATGTGGTGCACTTGAATATTTGTTCACGGAGTATCTTGCTAGATAAGAATTTTGAACCCAAGTTATCCAATTTTGGAGATGCCAAGTTTTTGAACCCCAACAACCATGAGAGTCTAGGCATGTCGTTTTATATCAAGGATGGGAAGAAGGATGTTTATGATTTTGGTAATGTAATTTTTGAGTTGGTCACGGGAAAATTATATGAGGAATTGGTGGAGAGTTCATGTAACAATGCTAATCTATCTCCTAATCCTTCAAGTTTTTATAGTGCAATTGATAAGTTTATTATTGGTGAAGGGTTTGAAAGTGAAGCGTTTATGCTCATCAAGATTGCTTGCGAGTGTGTTCAGCCTTTTCCAGAACAAAGACCAACAATGGTTCAAGTCTACAACAAAATGAGCAGTCTATGGGAAGAGGGACATGAACTTTGCGGTGATTCTAACACTTGCACGCGATCAGAGAGTTTTTCTGCTACTGACCGTGATGAATTTGTTGAATTATAA 1086 0.3821 MKQGSMSPKTRMGITITILIFTQILLCIHATETDIFCLKSIKDSLEDPYNFLASWDFILTSTMKFEELNDAKDGFSINNAIGFGKMGIMYKGTLANGWHLAIKKLTDSQQFGRQVLIEIRILGKLRHRNIVPLLGFCIDNDERILVYPYFSNGRLSKWLHPLETEAMILTWPQRINIALGVARALSWLHHLCNLHVVHLNICSRSILLDKNFEPKLSNFGDAKFLNPNNHESLGMSFYIKDGKKDVYDFGNVIFELVTGKLYEELVESSCNNANLSPNPSSFYSAIDKFIIGEGFESEAFMLIKIACECVQPFPEQRPTMVQVYNKMSSLWEEGHELCGDSNTCTRSESFSATDRDEFVEL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3351 361 PANTHER RECEPTOR-LIKE PROTEIN 55 61 330 - -
Amo12g3351 361 Gene3D Transferase(Phosphotransferase) domain 1 150 347 - -
Amo12g3351 361 Gene3D Phosphorylase Kinase; domain 1 51 149 - -
Amo12g3351 361 SUPERFAMILY Protein kinase-like (PK-like) 58 325 IPR011009 -
Amo12g3351 361 MobiDBLite consensus disorder prediction 338 361 - -
Amo12g3351 361 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 61 330 - -
Amo12g3351 361 ProSiteProfiles Protein kinase domain profile. 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g3351 361 Pfam Protein kinase domain 77 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3351 Amo-Chr12 122670430 122673772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3351 63 333 Receptor kinase-like Gene Family AT1G27190 34.694 4.88e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Amo12g3351 Pkinase 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3351 - - aip:107627994 605.52