Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3332 ATGTTGGAATCTCTAGCTTATTGCCAAAGCTTTAAGGGATATGACCTTACTAAGCAGAAGAGTCCAGGATGTTCTCATGTTCTTTCACGCATATGTAGAAGTTCTGTGTTCATGTTTTATTCAGTCAGCAAGCAAGTCACGCCGCAACCACGCTGTGCTAGTCATGGGATAGTTAACAGGAGTTCTTTCTCAGAAGGTTTCTTTAACAGCAAGCCTCTCTCTGTACCATTGTTTTCCGGAAGTAAAGGATTCTATTCATTTAAGTATAGTCCATCGCGTTGGCAAAGACTGCAGACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAACGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTACCCACACTCAAATCAGTTAAAACCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAATTTTGTCTGAATGGGGGATTCTTTTCTTGCTATTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGGATGGGATTGGCTCAGGTTGTACTATGTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGAGCTGTTGGAACGAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTAGTGAACATCAGAAGCATTGATGAAGCTGTAGTGATTGGTGCTGCTCTTTCTTTATCATCATCTGCTTTTGTTCTTCAGCTCCTTGCTGAGAAAGGTGAGCTTCCCACAAGATTTGGTTCGGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATACTAGAGACCCAGAATATGTCTGAGGAAAGTCTTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCCGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACCGTTGCTGGGATTTCACTAGGCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCAATCTTAGCTGAGACAAATTTCAGAACCCAGATTGAAGCAGATATAAGACCATTTAGAGGCTTGCTTCTTGGGTTATTTTTCGTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTACTTTCACTGTTGGCAGGTTTAATTACTATCAAGACATTGATCATAACAGCGATTGGTCCTCGTGTTGGACTTACTTTACAAGAAAGTGTGAGAATAGGGTTGTTGCTCTCCCAAGGAGGTGAATTTGGATTTGTAGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAGGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGAAAAATCTAATACTGAGAATAAAGCTTCTGAGAAGGTTAACTACAATGTCAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCGAATTTCCTGGGCAGTCCATTTGCTTCAGGAGTAGACAGTGTTTCAGTAGGATGGCCTTATGTGGTTTTTGATCTTAACCCGACAGTAGTAAAGGAAGCTCAAAAACTTGGTTTTCCTATTCTTTATGGAGACGGATCACGTCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCTAAAGCTATCATGATTATGTACACTGGCAAGAAGAGGACAATTGAAGCTGTTCAAAGGTTGCGATTGTCTTTTCCCGCGATTCCAATATATGCAAGAGCTCAAGATCTCAAGCATCTTTTAGATTTGAAGAAAGCTGGTGCAACAGATGCCATTATGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCCAAGCTTCTAAAAGGCCTTGGTGTTATGTCTGATGATGTAGTATTCCTAAGCCAGCTTATTAGGGATTCCATGGAGCTACAAGCTCAAGAAGCAGTTGGTTTATCCGATCGAGACCTAGATATTATGAAACCGCTACAGGTGAGAGTTTCTGACTTGATGGAGGCAGGCGTACCAACAGCTTCACCGGAACACGAACCATCAGAAATGCACCTGAAAGATCAAGCTTCATTGGGTACAATTCAAGATGAAGTGGTTGCTGAAGAACAAGATTATGAGCTAAGACAAGCTGTGAATTCACAAGGAAATGGTGCTCTAAATGGGAAACAAGGCACTGAAGATCAAATCTCAATGGTTGGTTCAAAAGATGCAATGGTGGACACATCATCAATCTCTTCCCATAATGCCATGGAGGAACCCTAA 2439 0.417 MLESLAYCQSFKGYDLTKQKSPGCSHVLSRICRSSVFMFYSVSKQVTPQPRCASHGIVNRSSFSEGFFNSKPLSVPLFSGSKGFYSFKYSPSRWQRLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTLKSVKTSPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLCTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESLWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADSRSSEAFVALCLLTVAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLSLLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSNTENKASEKVNYNVSEPVVILGFGQMGQVLANFLGSPFASGVDSVSVGWPYVVFDLNPTVVKEAQKLGFPILYGDGSRPAVLQSAGISSPKAIMIMYTGKKRTIEAVQRLRLSFPAIPIYARAQDLKHLLDLKKAGATDAIMENAETSLQLGSKLLKGLGVMSDDVVFLSQLIRDSMELQAQEAVGLSDRDLDIMKPLQVRVSDLMEAGVPTASPEHEPSEMHLKDQASLGTIQDEVVAEEQDYELRQAVNSQGNGALNGKQGTEDQISMVGSKDAMVDTSSISSHNAMEEP* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3332 812 MobiDBLite consensus disorder prediction 770 812 - -
Amo12g3332 812 Gene3D - 114 514 IPR038770 -
Amo12g3332 812 Pfam Sodium/hydrogen exchanger family 121 506 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo12g3332 812 ProSiteProfiles RCK N-terminal domain profile. 537 669 IPR003148 GO:0006813
Amo12g3332 812 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 537 675 IPR036291 -
Amo12g3332 812 Pfam TrkA-N domain 538 662 IPR003148 GO:0006813
Amo12g3332 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 748 - -
Amo12g3332 812 Gene3D - 537 706 - -
Amo12g3332 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3332 Amo-Chr12 122503649 122511428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3332 1 787 Inorganic Solute Cotransporters AT4G04850 68.996 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3332 - - aprc:113858933 1219.53