Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3322 ATGGCTGCAAAACTTGAAGGTGGTGGAGCTTATCTCTCTTCCTTTGTAGATGTTGTTTTAAAGAAGCTGTATTTAGTACTTGATGACGACGACTCATTCACCGAAAGGAACAACTTGCTTGGAAGATTGGAGAAAAGTCTGTCTGATGTTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTAACGAGAAAGTGAAGAGTTGGCTTGATGATCTCCAAGATGCTCTCTATAAGGCTGATGACTTGCTCGATGAACTCTCCACTGAAGCTGCCATTGCCACCCAAAGGGATCCAGGTAACTCTTATTCCTGGTCTCATCCGGTTGATTCATATATTAATTATAGTAGTGGCAAGGAAAAAGTAGTTCAAAGACTAGAGTATGTTGTAGCACGCAAAAATTTACTTCATCTGAAGGAGAGTGCCAAGGTGGACATGTCATCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCCGACATATTTGGTCGGGACAATGACAAGGAAAAGATAATCAAATTGTTGCTAAATGATACTTGTCATGCTGAATCACCTGTCACTGTGATCCCTATTGTGGGTCTGGGTGGAATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAGTGGCGAAAAATTTTGACCTTAAAGTGTGGGTGTGTGTTGCTGAAAACTTTGATCCTGTTAACCTTACACGGATTATACTAAAGAAAATAACTTCTTGTTCTTGTGACACCGATGACTTTGAATCACTTCAGACTGATTTGAAGGATAAGTTGGCAGGGAAGAGATTCTTAGTTGTTTTAGATGACGTCTGGGATGATCGAGAGGATATATGGGAGGATATTCTAAAACCTTTTTGGTACGAGAATAATGGAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTGTTTTCACAGCTACTAATCAACATTACCAACTGCGTTTATTGTCTGATCAAGACTGTTGGTCGGTGTTTTTTAGGCATTCATCTCTTTCTATTAATTCTAAACAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTCGGAGGTTTATTGCGCCACAAGTATAATGTAGGGGACTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCCCAGAAGATAAGAGTAAGATTGTTCCTGCATTAAGAGTAAGCTATCACTATCTTCCTTCACATCTAAAGCGGTGCTTTATTTACTGCTCATTATTTCCTGAGGATTATCAATTTGACAAAAATGAATTAATCTTGCTGTGGATGGCTGAAGATCTCGTACTACCAAACGAAAACTACACGTTAGAAAATATTGGTTGTACATATTTTGATGAGTTAGTTGCAAGGTCATTTTTTCAACCTAGTATTGATGTTGGTTTATTTGTAATGCATGATCTCATGCATGATTTAGCAACATTTTTTGCTGGAAAGTTTTATTTCAGAGTCAGAGAATTTGGAGATCTACAAAAGATTCACGACAAAACTCGTCATTTGTCATATACGGCAAATCCTAACGATCCAGTCATACGACTTGGAGAGCCCTACAAGGGAGAAACTCATATGAGAACATTTCTAGTTGTTCATTTGCTTCATCTTTATGAATTAATTGATATAACAAGTGATTCTTTGCACTTACAATTATTAGAATTGAGGTGTTTAAGAGCGTTGTCATTTAAATGTTTTTGTATTGAGTCATTGCCTGATTCAATAGATAAACTGATCCATTTGCATTATTTGGATCTCTCTTACACCCTTATTTTGACATTGCCCGAGTCATTGTGTAAATTATACAATCTCCAAACGTTGAAGTTGACTTATTGTGAGAGGCTGAAGATTCTTCCTTGCCGTATGCAAGATCTAGTGAACCTGCGCCATCTTGATATTGAAGGAACTTCTTCGTTGATAGAGATGCCAAAGGGAATGAGCAAGTTAAAACATCTGAACTTCTTGAGTGGTTATATTCTCGGCAAGCAGGAGGAGAATGGAATAAGAGAATTGGGATCACTTGACAATCTTCATGGCTCACTATGTATTTCCAACTTAAAGAATGTCAACAACAGCCGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACATTTTAGAATTGAAATGGATTCCAGAGGACGATGACGAGGAAGATGATGATGTTGATTTTCAAAAAGAGAGAAACATACTTGGGGAGTTACAACCTCACCGAAACTTGAAAGAGTTATCAATTGATGATTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCAACTTGAGTATGTATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTAGGACAGTTACCCTCTCTGGAGCATCTCAGAATTTTTGATTTCGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATCTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGATATTTTGTGGAATGCCTCGCTGGCGAGAGTGGCATACTCCTGATGACTTTGACGGATTTCCGAAACTTAAAAAACTTGACATAGCAGAATGTCCGGTGTTAAGTGGAGATCTGCCAGCTCACCTTCCGGAAATGGAGCAACTTACCATTTGGAAGTGCGAAGAGCTTGCATGTTCGCTGCCGAGAGCTCCCAAGCTTCAAGAATTACTTGTAAGTAGTTCTGAGTGCTTGGAGGATGTGAAACCGCACGAGGTAGTAATTGAAGAAACTCAGCAGGCGAAGTCCGTATTGGAGTGCCTGCTCCACATCGAATCGCTGTGTCTCCAAAGTTTGAAAATCCAGAAGTGTTCATCAGCCATATCAATTTCAGGAGACTATTTGCCGGATTCATTACAAGATCTGAGGATATCAGATTGTTCAAAATTAACATTCTCTAAGCCATTGCAACACAAGTCCCTAACGGAGATACATGTGTCCCAGTGTGATTCACTGACGTTGTTTCCATTGGGGTCCCTTCCAAATCTCAAGAAACTCTCAATCTCAGAATGCCCCCGTTTAGCATCCGTGCCGGGGCTAGGCTTTTCTGCGCCACACCTAGAGATACTGGAAATTGATGCTTGCGAAGAAATAGATTCTTTTGGAGAGGAGTGCCTCCCACCGAGCTTGACAACTCTTCGGATCAGTAAATGCGAGAAACTAGAGAGGTGGATAACATCCAATGGTTTGCAGGGTGAAGAATCTCCTTTGAGGTGCAAAGTGGAAGGGATGAAGGATCAACAAATTCAATCATAA 3324 0.4007 MAAKLEGGGAYLSSFVDVVLKKLYLVLDDDDSFTERNNLLGRLEKSLSDVGPVLDDAEQKQFTNEKVKSWLDDLQDALYKADDLLDELSTEAAIATQRDPGNSYSWSHPVDSYINYSSGKEKVVQRLEYVVARKNLLHLKESAKVDMSSWRTPSTSLVVSSDIFGRDNDKEKIIKLLLNDTCHAESPVTVIPIVGLGGIGKTTLAQLVYNDAKVAKNFDLKVWVCVAENFDPVNLTRIILKKITSCSCDTDDFESLQTDLKDKLAGKRFLVVLDDVWDDREDIWEDILKPFWYENNGSKILLTTRSEKVASVFTATNQHYQLRLLSDQDCWSVFFRHSSLSINSKQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRHKYNVGDWENILESEIWELPEDKSKIVPALRVSYHYLPSHLKRCFIYCSLFPEDYQFDKNELILLWMAEDLVLPNENYTLENIGCTYFDELVARSFFQPSIDVGLFVMHDLMHDLATFFAGKFYFRVREFGDLQKIHDKTRHLSYTANPNDPVIRLGEPYKGETHMRTFLVVHLLHLYELIDITSDSLHLQLLELRCLRALSFKCFCIESLPDSIDKLIHLHYLDLSYTLILTLPESLCKLYNLQTLKLTYCERLKILPCRMQDLVNLRHLDIEGTSSLIEMPKGMSKLKHLNFLSGYILGKQEENGIRELGSLDNLHGSLCISNLKNVNNSREALEAKMGNKKHINILELKWIPEDDDEEDDDVDFQKERNILGELQPHRNLKELSIDDYRGEIFPDWLGLSCYSNLTNLSMYRCKNCRQLPSLGQLPSLEHLRIFDFDGLERIGGEFYNNAESSHQGTPFRSLQTLIFCGMPRWREWHTPDDFDGFPKLKKLDIAECPVLSGDLPAHLPEMEQLTIWKCEELACSLPRAPKLQELLVSSSECLEDVKPHEVVIEETQQAKSVLECLLHIESLCLQSLKIQKCSSAISISGDYLPDSLQDLRISDCSKLTFSKPLQHKSLTEIHVSQCDSLTLFPLGSLPNLKKLSISECPRLASVPGLGFSAPHLEILEIDACEEIDSFGEECLPPSLTTLRISKCEKLERWITSNGLQGEESPLRCKVEGMKDQQIQS* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3322 1107 Gene3D - 324 408 IPR042197 -
Amo12g3322 1107 SUPERFAMILY RNI-like 838 1078 - -
Amo12g3322 1107 Gene3D - 147 319 IPR027417 -
Amo12g3322 1107 Gene3D Ribonuclease Inhibitor 540 935 IPR032675 -
Amo12g3322 1107 Pfam Rx N-terminal domain 15 94 IPR041118 -
Amo12g3322 1107 SUPERFAMILY L domain-like 483 901 - -
Amo12g3322 1107 PANTHER DISEASE RESISTANCE PROTEIN RP 36 987 IPR044974 GO:0006952
Amo12g3322 1107 Gene3D - 409 493 IPR036388 -
Amo12g3322 1107 Gene3D Ribonuclease Inhibitor 936 1088 IPR032675 -
Amo12g3322 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 424 IPR027417 -
Amo12g3322 1107 Coils Coil 71 91 - -
Amo12g3322 1107 PANTHER OS05G0414200 PROTEIN 36 987 - -
Amo12g3322 1107 Gene3D - 16 122 - -
Amo12g3322 1107 PRINTS Disease resistance protein signature 639 655 - -
Amo12g3322 1107 PRINTS Disease resistance protein signature 190 205 - -
Amo12g3322 1107 PRINTS Disease resistance protein signature 263 277 - -
Amo12g3322 1107 PRINTS Disease resistance protein signature 361 375 - -
Amo12g3322 1107 Pfam NB-ARC domain 167 409 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3322 Amo-Chr12 122348302 122352560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3322 188 844 WRKY Transcription Factor Family AT5G45050 22.760 2.64e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3322 - - ahf:112709990 1361.67