Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3320 ATGGCTGCAAAACATCAGGGTAGAGCTTATCTCTCTTCCTATGTTGATGCTGTTTTGAACAAGCTGTCTTCACTTGATGTCAACTCAACCCCGGAAGCAAAAAAGTTAGCTGACCAGAAGTTGTTTCAAAGATTGAAAGCGAGTCTCCGTGCCACTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCCGAGACCAAGAAGTCAACAAGTGGCTTGTTGATCTCCAAGATGCTCTTTATATGGCTGATGACTTGCTCGATGAACTCTCCACTAAAGCTGTCACTGCCACTCCCACTCAGAGGGATCCAGGTAACTCTTCTTCCTGGTCTCACTCTGTTGATTCAATTTTGGAAGATGGTGATGACGATGAGATGGGGGTAGTAACTAGGATGCAAGACATAGTTGACAAACTAGAGTCTATTGTTGAAGAGAAAGATGATCTTGATCTGAAACAAGGGGTTGCCAAAGATCTGGAGGACATGTCATGGAGAATTCAATCATCTCTGCTTGAAAGTCCTGATATATATGGCAGGAACGATGACAAGGAGGCCATCATAAAATTGTTATTAGATGAAACTTGTGATGATAAATTGTCTGTGATCTCTATAGAAGGTATAGGTGGAATTGGAAAGACTACTTTGGCTCAGTGGGTTTACAACGATGTCAGATTGAAGGACAAGTTTACCATTAATGCATGGGTGTGTGTTGCAATAAAATTTGATCCTGTTAATGTTACCAAGGCTATAATTGAAGACATAGCTTCTTCTCCTTGTAATATGGTTAACTTGAATTCAATTCAAACAGAATTGAAGGAAAAGTTAACGGGAAAGACATTCTTAGTAGTTTTAGATGATGTTTGGGATAATCAGCAAAATTTGTGGGACAATTTTCTAAAACCTTTTTTGAGTGGAAATAAAGGAAGTAAAATTCTTTTAACTACTCGTAATAAAAATGTTGATTCTATAGTGTCAACTACAAATCTACATTATAAACTAGATACATTGTCCAACGAAGATTGCTGGTCTTTGTTTTTGAAACATTCAACTATTTCTACTAGTTCTAGACAATATGTAATCTTAGAACAAATTGGTAAAAAAATTGTTGAAAAATGCAAGGGATTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGCAGTAAGGATAAAGTAGAGGATTGGGAGAATATACTGAGAAGTGAAATTTGGGAGCTTCCGGAAGATGAGAGTAAGATTGTTGCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCAAATTTAAAGCGGTGTTTTGTTTATTGCTCATTATATCCCCAAGATTATCAATTTGACAAAGATGAATTAATCTTGCTGTGGATGGCTGAAGGTCTCTTACAACCAATGGAAAAAAACACATTAGAAAATATTGGTTGTGCTTATTTTGATGAATTAGTTGCACGATCATTTTTTCAACTTTCTAGTGCTGATGCTGGATTATTTGTAATGCACGATCTCATGCATGATCTAGCAACATCAGCAACATCCTTTGCTGCAAAATTCTTTTTCAGAGTCGACAAATTTGGCAATCCACACATGGCAGACAGCAAAACCCGTCATTTGTCATATAATCGGGGTCGAATCTCAAAATTTCCAGAGGCCTATAATGGAGCAATCTATATGAGAACATTTCTACCTATTGATGTTCAATCAAATGATATTGAAAGTGATTTTTGGCTACAACAATTAAAGTGTTTAAGAGTTTTGTCATTTTGTGGCTTTAAAATCCTATCATTGCCTGATTCAATAGGTGAGTTGATCCATTTGCGTTATTTGGATCTCTCTGAAACACCTATTGTCACATTGCCTGAATCATTGTGTAGATTATACCATCTCCAAACATTGAAGTTGAGGGATTGTGAGAAGCTAGAGATGCTTCCTAGCCGCATGCAAGATCTTGTGAACCTACGCCATCTTGATATCAGGGGAGCTGATCGTTTAGAAGAGATGCCAAAAGGAATGAGTAAGTTAAAGCATCTGAACTTCTTAAGTGGTTATATTGTAGGGGAGCAAGTGGAGAATGGGATAAGAGAACTGGGAGCACTTGACGATCTTCATGGCTCACTTTGCATTTCCAAATTAGAGAATTTGAAAGACAAGAGAAACATACTTGTGGAGTTACAACCTCACCGAAACTTGAAAGAGTTATCAATTGATGGTTATAGGGGTGAAATATTCCCCGATTGGTTAGGCTTTTCTTGCTACTCCAATATCACTGAGTTGAGTCTGATTCGTTGTAAGAATTGCGGTCAGCTTCCTTCACTGGGACAGTTACCGTCTCTGCAGCATCTCAGGATTTTTGAACTGGATGGTTTAGAGAGAATTGGTGATGAGTTTTACAACAACGCTGGATCATCTCATCATGGGACACCCTTCAGATCTCTTGAAACTCTGGAATTTTGTGATATGCCTCGCTGGCGGGAGTGGCATATTCCTAATGGGTTTGATGGATTTCTGAAACTTAAAAGCCTTTCAATACAAGACTGTCCGGTGTTAAGTGGAGATCTGCCTGCTGACCTACCGGCTCTGGAGAAACTTACCATTAGGAATTGCGAAGAGCTTGCATGTTCACTGCCGCGAGCTCCCAAGCTTCACCAATTAAATGTAATGGGTTCTGGGCTGTTCTGGTATGGGTATGCGGCACCGCATGATGTAGTAATTAAAAATACTCAGCTGGCGAAGTCCATATTGGAGTGGCTGCCCCACTTCCAATCGCCGTGTCTCGAACGTTTGAAAATCCACAAGTGTTCGTCAGCCATATCAATTTCAGGAGACTCTTTGCCGGATTCATTACAATTTCTGAAAATCTCGGGTTGTTCAAACTTAACAATCTCAGAGCCACTGCAACACAAGTCCCTAACGGAGATAATTGTATTTGGGTGTGATTCACTGACGATGTTTCCATTGGGGGCCCTTCCAAATCTCAAGACACTATATATCTCAAGTTGCCGCCGTTTAGTATCCGTGCCGGCGCTAGGCTGTGCTGCACCCCACCTAGATATACTGGAAATACATGAATGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTGGGATCAGAAGATGCCAGAAACTAGAGAGGTGGATAACTTGGAGGGGTTTGCAGAGTGAAGGCCTTACACGTCTTTTGTTTCATCGATGGAATGAAGTTAAGTGGTTCCCAAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTATCTACATTTGTCGTCTTTTTCAAATCTGGAGACGCTAGACTGCAGGGGCCTTCACCAACTCACCTCCCTCAAACAATTAAAAATTGAAAACTGTCCAAAGCTGGAGAATATCACACAACAAAACCTGCCTGCCTCCATATCAAAACTCCGCATCAAAGGAGAATGTCCATTGGGGAGCAAGCTGGAAGAGATGAACGACCCACGGATTCAATGCGAAACAGACAAATTGTCTTCAATACTTGAAGATGACTCTGTCCTTCAAGGAAACTACTCTGCCCAGGAGTTGCTTGGAAGGTTGGAGAAAAGTCTGTATGATGTTGGACCTGTTCTTGATGATGCCGAGCAGAAGCAGTTCACCGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCCGATGACTTGCTCGATGAACTCTCCACTGAAGCCGCTATCGCTGCCATTCAAACGGATCCAGGTAACTCTTCTTCCCGGTCTCGTGTGGTTGATTCATATATTGAAGACAGTGGTGATATGGAAAAAATAGTTGGTACACTAGAGTCTGTTGTAGCAAAGAAAAATTATCATCGTCTAAAAGAGTGCGCCAAGGTGGACATGTCGTCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTTGGTCGGGACGAAGACAAGGAGAAGATAATCAAATTGCTGTTAGATGATACTTGTCATGCTAAATCACCTGTGACTGTGATCCCCATTGTGGGTATGGGCGGAATAGGAAAAACTACTCTGGCTCAACTGGTTTACAGTGATGTCCAAGTGGTTGAAAATTTTGACACTAGAGTGTGGGTGTGTGTTGCTGAAAATTCCGACCCTGTTCATGTTACAAGGACAATAATAGCGGCACTAGATTCCTGTCCTTGTAGCATGGACAATTTTGATTTTCTTCAATCTGATTTGAAAAAAAAGTTGACAGGAAAGACATTCTTAGTTGTTTTGGATGATGTCTGGCATGATCAACGAGACACATGGGAAGATTTTTTGAAACCTTTTTGGGATGGAAATCCTGTAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGTTCGCAGCTCCTAATCAACATTATGAACTAAGTTTATTGTCAGACGAATATTGTTGGTCAGTGTTTTTGAAACATTCATGTATTTCTACTAATTCCGAACAATATCCAACTCTAGAACCAATTGGTAGAAAAATTGTTGCAAAGTGTAAGGGATTACCTTTGGCTGTGAAGATACTTGGAGGTTTATTGCGCAATAAGTATAATGTAAGGGATTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCCCGGAAGATGAAAATAAGATTGTTCCTGCATTAAGAGTTAGCTATCACTACATCCCTTCACATTTAAAGCGATGCTTTGTTTATTGCTCATTGTATCCAAAAGATTATCAATTTCACAAAGATGAATTAATCTTGTTGTGGATGGCTGAAGATCTCTTACAGCCAATTGGAAACAATGCATTAGAAGATATTGGTTGTGCTTATTTTGATGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTGCTTATGCTGGATTCTATGTAATGCATGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTCTTGTTCAGAGTCGACAAATTTGGCAATCCACACATGGCTGAGAGCAAAACTCGTTATTTGTCATATAATCGGGATCCAATCTCAAAATTTCTTGAGGCCTATAATGGAATATATATGAGAACATTTCTACCTGTTTATGTTCAATCAAATGATATTGGATGTGATTTTTGGCTAAAACAATTGAAGTGTTTAAGAGTTTTGTCATTTTGTGGCTTTAAAATCCTGTCATTGCCTGATTCAATAGGTGAGTTGATCCATTTGCGTTATTTGGATCTCTCCAAAATACCTATTGTCACGTTGCCTGAATCATTGTGTAGATTATACAATCTCCAAACATTGAAGTTGAGGGATTGTGAGAAGCTAGAGATGCTTCCCAGCCGCATGCAAGATCTTGTGAACCTACGCCATCTTGATATCAGGGGAGCTGATAGTTTAAAAGAGATGCCGAAAGGAGTGAGCAAGTTAAAGCATCTGAACTTCTTAATTCGTTATATTGTCGGGGAGCAAGTGGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGTTCACTTTGCATTTCCAACTTAGAGAATGTGAACAACAGCGGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACATTTTAGAATTGAAATGGCTTCCAGAAGATAATGGTGGTGATACTGTTGATGTTGAAAAAGAGAGAGAGATACTTGAGAAGTTACAACCTCACCGAAACTTGGAGGAGTTATCAATTTATAGTTACAGGGGTGAAACATTCCCCGATTGGTTAGGCCTTCCTTGCTACTCCAATATGACTACATTGATTCTGGCTTTCTTTAAGAATTGCCGTCAGGTTCCTTCACTGGGACAGTTACCCTCTCTGCAGCATCTGTTGATATGGGGACTTGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATTTCATCAGGGGACACCCTTCAGATCTCTTCAAACTCTGGCATTTGGTGGAATGCCTCGCTGGCGAGAGTGGCATATTCCTGATGACTTTGATGGATTTCCTATACTTAAAAGCCTTTCAATAGAAGACTGTCCGGTGTTAAGTGGAGATCTGCCCGCTCACCTTCCGGCTCTGGAGGAATTGGATATACGGGAATGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTCTGATCAGAAGATGCCAGAAACTGGAGAGTTGGATAACATCAAAGGGTTTGCAGAGTGAAGGCCTTACCCATCTTAGCCTTCGACAATGGAATGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCGGTCTCTACAATTGTCGAAATTTTCAAATCTGGAGACGCTAGACTACAAGGGCCTTCTCCAACTCACCTCCCTCCAACAATTAACAATTGGATTCTGTCCAAAGCTGGAGAATATCACACAACAAAACCTGCCTGCCTCCATATTGAAACTCATCATCAAGGGAGAATGTCCATTGAGGAGTAAGCTGGAAGAGATGAACGACCCCCGGATTCAATTCCAAACAGGTAATTGTTTTTGCTCTCATCTTTCCTAA 6531 0.4077 MAAKHQGRAYLSSYVDAVLNKLSSLDVNSTPEAKKLADQKLFQRLKASLRATRPVLDDAEQKQIRDQEVNKWLVDLQDALYMADDLLDELSTKAVTATPTQRDPGNSSSWSHSVDSILEDGDDDEMGVVTRMQDIVDKLESIVEEKDDLDLKQGVAKDLEDMSWRIQSSLLESPDIYGRNDDKEAIIKLLLDETCDDKLSVISIEGIGGIGKTTLAQWVYNDVRLKDKFTINAWVCVAIKFDPVNVTKAIIEDIASSPCNMVNLNSIQTELKEKLTGKTFLVVLDDVWDNQQNLWDNFLKPFLSGNKGSKILLTTRNKNVDSIVSTTNLHYKLDTLSNEDCWSLFLKHSTISTSSRQYVILEQIGKKIVEKCKGLPLAVKTLGGLLRSKDKVEDWENILRSEIWELPEDESKIVAALRVSYHYLPSNLKRCFVYCSLYPQDYQFDKDELILLWMAEGLLQPMEKNTLENIGCAYFDELVARSFFQLSSADAGLFVMHDLMHDLATSATSFAAKFFFRVDKFGNPHMADSKTRHLSYNRGRISKFPEAYNGAIYMRTFLPIDVQSNDIESDFWLQQLKCLRVLSFCGFKILSLPDSIGELIHLRYLDLSETPIVTLPESLCRLYHLQTLKLRDCEKLEMLPSRMQDLVNLRHLDIRGADRLEEMPKGMSKLKHLNFLSGYIVGEQVENGIRELGALDDLHGSLCISKLENLKDKRNILVELQPHRNLKELSIDGYRGEIFPDWLGFSCYSNITELSLIRCKNCGQLPSLGQLPSLQHLRIFELDGLERIGDEFYNNAGSSHHGTPFRSLETLEFCDMPRWREWHIPNGFDGFLKLKSLSIQDCPVLSGDLPADLPALEKLTIRNCEELACSLPRAPKLHQLNVMGSGLFWYGYAAPHDVVIKNTQLAKSILEWLPHFQSPCLERLKIHKCSSAISISGDSLPDSLQFLKISGCSNLTISEPLQHKSLTEIIVFGCDSLTMFPLGALPNLKTLYISSCRRLVSVPALGCAAPHLDILEIHECPEMDCFGEECLPPSLTTLGIRRCQKLERWITWRGLQSEGLTRLLFHRWNEVKWFPREGCLPASLQYLHLSSFSNLETLDCRGLHQLTSLKQLKIENCPKLENITQQNLPASISKLRIKGECPLGSKLEEMNDPRIQCETDKLSSILEDDSVLQGNYSAQELLGRLEKSLYDVGPVLDDAEQKQFTDKRVKKWLVDLQDALYMADDLLDELSTEAAIAAIQTDPGNSSSRSRVVDSYIEDSGDMEKIVGTLESVVAKKNYHRLKECAKVDMSSWRTPSTSLVVSSDIFGRDEDKEKIIKLLLDDTCHAKSPVTVIPIVGMGGIGKTTLAQLVYSDVQVVENFDTRVWVCVAENSDPVHVTRTIIAALDSCPCSMDNFDFLQSDLKKKLTGKTFLVVLDDVWHDQRDTWEDFLKPFWDGNPVSKILLTTRSEKVASVFAAPNQHYELSLLSDEYCWSVFLKHSCISTNSEQYPTLEPIGRKIVAKCKGLPLAVKILGGLLRNKYNVRDWENILESEIWELPEDENKIVPALRVSYHYIPSHLKRCFVYCSLYPKDYQFHKDELILLWMAEDLLQPIGNNALEDIGCAYFDELVARSFFQLSSAYAGFYVMHDLMHDLATFFAGKFLFRVDKFGNPHMAESKTRYLSYNRDPISKFLEAYNGIYMRTFLPVYVQSNDIGCDFWLKQLKCLRVLSFCGFKILSLPDSIGELIHLRYLDLSKIPIVTLPESLCRLYNLQTLKLRDCEKLEMLPSRMQDLVNLRHLDIRGADSLKEMPKGVSKLKHLNFLIRYIVGEQVENGIRELGALDNLHGSLCISNLENVNNSGEALEAKMGNKKHINILELKWLPEDNGGDTVDVEKEREILEKLQPHRNLEELSIYSYRGETFPDWLGLPCYSNMTTLILAFFKNCRQVPSLGQLPSLQHLLIWGLDGLERIGGEFYNNAESFHQGTPFRSLQTLAFGGMPRWREWHIPDDFDGFPILKSLSIEDCPVLSGDLPAHLPALEELDIRECPEMDCFGEECLPPSLTTLLIRRCQKLESWITSKGLQSEGLTHLSLRQWNEVKSFPREGCLPASLRSLQLSKFSNLETLDYKGLLQLTSLQQLTIGFCPKLENITQQNLPASILKLIIKGECPLRSKLEEMNDPRIQFQTGNCFCSHLS* 2177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3320 2176 Pfam Rx N-terminal domain 15 97 IPR041118 -
Amo12g3320 2176 Pfam Rx N-terminal domain 1160 1237 IPR041118 -
Amo12g3320 2176 Gene3D - 1155 1266 - -
Amo12g3320 2176 Gene3D - 15 122 - -
Amo12g3320 2176 Gene3D - 420 507 IPR036388 -
Amo12g3320 2176 Gene3D - 1552 1637 IPR036388 -
Amo12g3320 2176 Gene3D - 335 419 IPR042197 -
Amo12g3320 2176 Gene3D - 1467 1551 IPR042197 -
Amo12g3320 2176 PRINTS Disease resistance protein signature 1504 1518 - -
Amo12g3320 2176 PRINTS Disease resistance protein signature 1333 1348 - -
Amo12g3320 2176 PRINTS Disease resistance protein signature 2015 2031 - -
Amo12g3320 2176 PRINTS Disease resistance protein signature 1406 1420 - -
Amo12g3320 2176 SUPERFAMILY L domain-like 917 1138 - -
Amo12g3320 2176 MobiDBLite consensus disorder prediction 97 121 - -
Amo12g3320 2176 PANTHER DISEASE RESISTANCE PROTEIN RP 1178 2056 IPR044974 GO:0006952
Amo12g3320 2176 PANTHER DISEASE RESISTANCE PROTEIN RP 915 1122 IPR044974 GO:0006952
Amo12g3320 2176 PANTHER DISEASE RESISTANCE PROTEIN RP 34 957 IPR044974 GO:0006952
Amo12g3320 2176 SUPERFAMILY L domain-like 495 878 - -
Amo12g3320 2176 PANTHER OS05G0414200 PROTEIN 34 957 - -
Amo12g3320 2176 SUPERFAMILY L domain-like 1627 2055 - -
Amo12g3320 2176 SUPERFAMILY L domain-like 2017 2135 - -
Amo12g3320 2176 Gene3D Ribonuclease Inhibitor 1691 2038 IPR032675 -
Amo12g3320 2176 Gene3D Ribonuclease Inhibitor 555 888 IPR032675 -
Amo12g3320 2176 Gene3D - 161 329 IPR027417 -
Amo12g3320 2176 Gene3D - 1291 1460 IPR027417 -
Amo12g3320 2176 Gene3D Ribonuclease Inhibitor 1031 1141 IPR032675 -
Amo12g3320 2176 Gene3D Ribonuclease Inhibitor 901 1030 IPR032675 -
Amo12g3320 2176 Gene3D Ribonuclease Inhibitor 2039 2146 IPR032675 -
Amo12g3320 2176 SMART LRR_typ_2 1727 1750 IPR003591 -
Amo12g3320 2176 SMART LRR_typ_2 599 622 IPR003591 -
Amo12g3320 2176 PANTHER OS05G0414200 PROTEIN 1178 2056 - -
Amo12g3320 2176 PANTHER OS05G0414200 PROTEIN 915 1122 - -
Amo12g3320 2176 MobiDBLite consensus disorder prediction 97 115 - -
Amo12g3320 2176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1292 1567 IPR027417 -
Amo12g3320 2176 Pfam NB-ARC domain 180 401 IPR002182 GO:0043531
Amo12g3320 2176 Pfam NB-ARC domain 1310 1553 IPR002182 GO:0043531
Amo12g3320 2176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3320 Amo-Chr12 122295221 122309862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3320 171 784 WRKY Transcription Factor Family AT5G45050 21.720 1.03e-12 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3320 - - ahf:112708719 1285.01