Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3319 ATGGGCGGAATAGGAAAAACTACTCTGGCTCAACTGGTTTACAGTGATGTCCAAGTGGTGAAAAAATTTGACACTAGAGTGTGGGTGTGTGTAGCTGAAAATTCCGATCCTGTTCATGTTACAAGGACAATAATAGCGGCACTAGATTCCCGTCCTTGTAATATGGACAATTTTGATTTTCTTCAATCTGATTTGAAGGAAAAGCTGATAGGAAAGACATTCTTAGTTATTTTGGATGATATCTGGAATGATCAACAAGACACATGGGAGGATTTTCTAAGACCTTTTCGGTATGGGAATAATGGAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGTTCGTAGCTCCTAATCGACATTATCAACTAAGTTTATTGTCAGGCAAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTGTTTCTACTAATTCCGAACAATATGCAACTCTAGAACCAATTGGTAAAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGAGGCTTACTGCGCAATAAGTATAATCTAGGGGATTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCCCCGAAGATGAAAATAAGATTGTTCCAGCATTAAGGGTTAGCTATCACTATCTCCCTTCACATTTAAAGCGGTGCTTTGTTTATTGCTCATTGTATCCTGAAGATTATCAATTTGACAAAGATGAATTAATCTTGTTGTGGATGGCTGAAGGTCTCTTACAACCAATGGAAAAAAACACATTAGAAAATATTGGTTGTGCATATTTTGATGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTGCTGGTGCTGGGTTATTTGTAATGCACGATCTCATGCATGATTTAGCAACGTTTTTTGCTGGAAAATTCTTTTCCAGAGTCTTTGAATTTGGCAATCCACACATGGCAGACAGCAAAACCCGTCATTTGTCATATAATCAGGGTCCAATCTCAAGTTTTCTTGAGGCCTATAATGGAGCAATATATATGAGAACATTTCTATGTGTTCAGGCTAAATCAATTGATATTAAATGTGATTTTTGGCCACAACAATTAAAGTGTTTAAGAGTTTTGTCATTTCGTACCTTTCAAATCCTGTCATTGCCTGATTCAATAGGTGAGATGATCCATTTGCGTTATTTGGATCTCTCTGGAATACCTATTGTCACATTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACGTTGAAGTTGAGTTATTGTAAGAAGCTGGAGATGCTTCCTAGCCGTATGCAAGATCTTGTGAACCTGCGCTATCTTGATATCAGAGGTTCTGATTCTTTAAAAGAGATGCCGAAGGGAATGAGCCAGTTAAAGCATCTGAATTTCTTAAGTGATTATATTGTGGGAAAGCATGAGGAGAACGGGACAAGAGAATTGGGAGCACTTGACAACCTTCATGGCTCACTTTGCATCTCCAAGTTAGAGAATGTGAACAACAGCCGTGAAGCTTTGGAGGCGAAGATGGGTAACAAGAAGCAAATCAACATTTTAGAATTGAAATGGCGTACAGAAGGTTATATTGTTGATGTTGAAACTGCAAGAGACATACTTGAGGAGTTACAACCTCACCGAAACCTGGAAGAGTTATCAATTAATGGTTATAGCGGTGAAATATTCCCCGATTGGTTGGGCCTTTCTTCCTACTCCAATGTAACCAAACTGATTCTGTTGAGTTGTAAGAATTGCCGTCAGGTTCCTTCACTGGGACAGTTACCGTCTCTGCAGCATCTGGAGATATGTGGACTTGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATTTCATCAGGGGACACCCTTCAGATCTCTTCAAACTCTGGAATTTCGGAGAATGCGTCGCTGGCGAGAGTGGCATCTTCCTAATGACTTTGATGGATTTCTGAAACTTAAAAGGCTTTTAATAGAAGACTGTCCGGTGTTAAGTGGAGATCTGCCAGCTCACCTTCCGGCTCTGGAGGAACTTACCATTTATAGATGCGAAGAGCTTGCGTGTTCACTTCCCAGGGCTCCCAAGCTTCACCAATTAACTGTAGATGGTTCTAAGAGTTTTTGGTCTGCGGGACCGCATGACGTAGTAATTCTCGAGACTAAGCTGGCGAAGTATGTAGTGGAGTGGCTACCCCACATCCAATCGCCGTGTCTCCAAAATTTGTTGATCGAGGGGTGTGAGTCAGCAATATCAATTTCAGGAGATTATTTGCCCGATTCATTCCAATATCTGAGAATCCAGGATTGTTCAGAATTAACATTCTCAGAGCCACTGCAACACATGTCCCTAACGGAGATATATATTGACAACTGTGATTCACTGACCATGTTTCCATTGGGGGCCCTTCCAAATCTCAAGGAACTCACAATATTGGAGTGCCCCAGTTTAGTATCCTTGCCGGGACTAGGCTTTGCTGCGCCCCACCTAGAGGAACTGTATATGCGGGATTGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACGACTCTTGTGATCTGTAACTGCCAGAAAGCAGAGAGGTGGATAACATCAAACGGTTTGCAGAGTGAAGGCCTTACCGATCTTTTCCTTTCCTTTTGGAATGAAGTTAAGGGGTTCCCAGGAGAGGGTTGCCTTCCTGCTTCCCTCAAGTATCTACAATTGTCGTACTTTTCAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACCATCTCACCTCCCTCCAACAATTAAGAATTGAAGAGTGTCCAAAGCTGGAGAATATCACACAACAAAACCTGCCTGCCTCCATATCAGAACTCCACATCAAGGGAAAATGTCCATTGGGGAGTAAGCTGGAAGAGATGAACGACCCACGGATTCAATACAAAAGAGGGCGGTTCATGTTATGA 2961 0.4147 MGGIGKTTLAQLVYSDVQVVKKFDTRVWVCVAENSDPVHVTRTIIAALDSRPCNMDNFDFLQSDLKEKLIGKTFLVILDDIWNDQQDTWEDFLRPFRYGNNGSKILLTTRSEKVASVFVAPNRHYQLSLLSGKDCWSVFLKHSSVSTNSEQYATLEPIGKKIVEKCKGLPLAVKTLGGLLRNKYNLGDWENILESEIWELPEDENKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKDELILLWMAEGLLQPMEKNTLENIGCAYFDELVARSFFQLSSAGAGLFVMHDLMHDLATFFAGKFFSRVFEFGNPHMADSKTRHLSYNQGPISSFLEAYNGAIYMRTFLCVQAKSIDIKCDFWPQQLKCLRVLSFRTFQILSLPDSIGEMIHLRYLDLSGIPIVTLPESLCKLYNLQTLKLSYCKKLEMLPSRMQDLVNLRYLDIRGSDSLKEMPKGMSQLKHLNFLSDYIVGKHEENGTRELGALDNLHGSLCISKLENVNNSREALEAKMGNKKQINILELKWRTEGYIVDVETARDILEELQPHRNLEELSINGYSGEIFPDWLGLSSYSNVTKLILLSCKNCRQVPSLGQLPSLQHLEICGLDGLERIGGEFYNNAESFHQGTPFRSLQTLEFRRMRRWREWHLPNDFDGFLKLKRLLIEDCPVLSGDLPAHLPALEELTIYRCEELACSLPRAPKLHQLTVDGSKSFWSAGPHDVVILETKLAKYVVEWLPHIQSPCLQNLLIEGCESAISISGDYLPDSFQYLRIQDCSELTFSEPLQHMSLTEIYIDNCDSLTMFPLGALPNLKELTILECPSLVSLPGLGFAAPHLEELYMRDCPEMDCFGEECLPPSLTTLVICNCQKAERWITSNGLQSEGLTDLFLSFWNEVKGFPGEGCLPASLKYLQLSYFSNLETLDCKGLHHLTSLQQLRIEECPKLENITQQNLPASISELHIKGKCPLGSKLEEMNDPRIQYKRGRFML* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3319 986 Gene3D - 214 299 IPR036388 -
Amo12g3319 986 Pfam NB-ARC domain 1 215 IPR002182 GO:0043531
Amo12g3319 986 PANTHER DISEASE RESISTANCE PROTEIN RP 1 944 IPR044974 GO:0006952
Amo12g3319 986 Gene3D Ribonuclease Inhibitor 718 949 IPR032675 -
Amo12g3319 986 Gene3D - 1 120 IPR027417 -
Amo12g3319 986 PANTHER OS05G0414200 PROTEIN 1 944 - -
Amo12g3319 986 Gene3D - 130 213 IPR042197 -
Amo12g3319 986 Gene3D Ribonuclease Inhibitor 341 717 IPR032675 -
Amo12g3319 986 SUPERFAMILY RNI-like 645 955 - -
Amo12g3319 986 PRINTS Disease resistance protein signature 68 82 - -
Amo12g3319 986 PRINTS Disease resistance protein signature 411 427 - -
Amo12g3319 986 PRINTS Disease resistance protein signature 166 180 - -
Amo12g3319 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 229 IPR027417 -
Amo12g3319 986 Coils Coil 498 518 - -
Amo12g3319 986 SUPERFAMILY L domain-like 289 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3319 Amo-Chr12 122282034 122285278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g3319 1 637 WRKY Transcription Factor Family AT5G45050 23.011 7.38e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3319 - - ahf:112708719 1310.43